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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..1782)
DNA (1782bp) protein (594aa)
amino acid permease-associated protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Amino acid permease-associated region id=2197762 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid permease-associated protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1837..3660)
DNA (1824bp) protein (608aa)
amino acid permease-associated protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Amino acid permease-associated region id=4193626 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amino acid permease-associated protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3703..6171)
DNA (2469bp) protein (823aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Replicative DNA helicase id=2197763 bin=GWA2_Methylomirabilis_73_35 species=Allochromatium vinosum genus=Allochromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
replicative DNA helicase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6168..7358)
DNA (1191bp) protein (397aa)
DnaB domain-containing protein; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Replicative DNA helicase id=2197763 bin=GWA2_Methylomirabilis_73_35 species=Allochromatium vinosum genus=Allochromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DnaB domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


comp(7362..7805)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
50S ribosomal protein L9 id=4193682 bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L9
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8019..8438)
DNA (420bp) protein (140aa)
ssb; Single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Single-stranded DNA-binding protein id=4193685 bin=GWC2_Methylomirabilis_70_16 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ssb; Single-stranded DNA-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


comp(8438..8785)
DNA (348bp) protein (116aa)
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
30S ribosomal protein S6 id=2197766 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsF; 30S ribosomal protein S6
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8763..9272)
DNA (510bp) protein (170aa)
hypothetical protein; K07105 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K07105 id=14627673 bin=bin7_NC10_sister species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9484..11103)
DNA (1620bp) protein (540aa)
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) id=14627672 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(11131..11418)
DNA (288bp) protein (96aa)
groS; chaperone Hsp10 (GroES), part of GroE chaperone system Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
groS; chaperone Hsp10 (GroES), part of GroE chaperone system id=14627671 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
groS; chaperone Hsp10 (GroES), part of GroE chaperone system
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11593..12570
DNA (978bp) protein (326aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26) id=14627670 bin=bin7_NC10_sister species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=bin7_NC10_sister organism_group=NC10
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12545..14608)
DNA (2064bp) protein (688aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627669 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15560..15691
DNA (132bp) protein (44aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15688..16632)
DNA (945bp) protein (315aa)
putative methanol dehydrogenase regulatory protein MoxR; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative methanol dehydrogenase regulatory protein MoxR; K03924 MoxR-like ATPase [EC:3.6.3.-] id=14627667 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative methanol dehydrogenase regulatory protein MoxR
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16879..18003)
DNA (1125bp) protein (375aa)
hypothetical protein; K07502 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K07502 hypothetical protein id=14627666 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17975..20341)
DNA (2367bp) protein (789aa)
DEAD/DEAH box helicase; K06877 DEAD/DEAH box helicase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Dead/deah box helicase id=4193701 bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DEAD/DEAH box helicase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20425..21003
DNA (579bp) protein (193aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Hypothetical membrane protein id=3950581 bin=GWC2_Methylomirabilis_70_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21090..22544
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TXH8_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22654..24201)
DNA (1548bp) protein (516aa)
oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Oligopeptide ABC transporter substrate-binding protein id=3716431 bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter substrate-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(24198..25406)
DNA (1209bp) protein (403aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Amidohydrolase id=2836306 bin=GWA2_Methylomirabilis_73_35 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(25498..26412)
DNA (915bp) protein (305aa)
appC; oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease; K02034 peptide/nickel transport system permease protein id=14627053 bin=bin7_NC10_sister species=Brevibacillus brevis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
appC; oligopeptide ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(26409..27326)
DNA (918bp) protein (306aa)
dppB; dipeptide transport system permease DppB; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
dppB; dipeptide transport system permease DppB; K02033 peptide/nickel transport system permease protein id=14627052 bin=bin7_NC10_sister species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
dppB; dipeptide transport system permease DppB
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

27395..27658
DNA (264bp) protein (88aa)
elongation factor Tu domain 2 protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
elongation factor Tu domain 2 protein id=14627051 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
Translation elongation factor-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(27757..29127)
DNA (1371bp) protein (457aa)
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] id=14627050 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RNA methyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

29293..29598
DNA (306bp) protein (102aa)
hypothetical protein id=14627049 bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

29595..31340
DNA (1746bp) protein (582aa)
TPR domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TPR domain-containing protein id=14627048 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
TPR domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

31315..32097
DNA (783bp) protein (261aa)
id=14627047 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627047 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

32113..33027
DNA (915bp) protein (305aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] id=14627046 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_29
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

33125..34063
DNA (939bp) protein (313aa)
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1) id=14627045 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_6630_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


34088..34792
DNA (705bp) protein (235aa)
50S ribosomal protein L25P; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
50S ribosomal protein L25P; K02897 large subunit ribosomal protein L25 id=14627044 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L25
Displaying items 1-30 of 55 in total

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