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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2..265)
DNA (264bp) protein (88aa)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13) id=14626458 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

396..1283
DNA (888bp) protein (296aa)
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
transcriptional regulator id=14626459 bin=bin7_NC10_sister species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
transcriptional regulator
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2397..3524
DNA (1128bp) protein (376aa)
Xaa-Pro aminopeptidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Xaa-Pro aminopeptidase id=14626461 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Xaa-Pro aminopeptidase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3652..4176
DNA (525bp) protein (175aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626462 bin=bin7_NC10_sister species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4197..6068
DNA (1872bp) protein (624aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] id=14626463 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6193..7212
DNA (1020bp) protein (340aa)
korB; 2-oxoglutarate ferredoxin oxidoreductase, beta subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
korB; 2-oxoglutarate ferredoxin oxidoreductase, beta subunit id=14626464 bin=bin7_NC10_sister species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
korB; 2-oxoglutarate ferredoxin oxidoreductase, beta subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7396..8844
DNA (1449bp) protein (483aa)
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15) id=14626465 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8846..10150
DNA (1305bp) protein (435aa)
FAD linked oxidase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
FAD linked oxidase-like protein id=14626466 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
FAD linked oxidase-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11429..13840)
DNA (2412bp) protein (804aa)
Histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Histidine kinase (EC:2.7.13.3)
two-component hybrid sensor and regulator id=14429067 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15045..16223
DNA (1179bp) protein (393aa)
Iron-sulfur cluster binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Iron-sulfur cluster binding protein id=14626470 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Iron-sulfur cluster binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16226..16954
DNA (729bp) protein (243aa)
hypothetical protein; K00782 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K00782 hypothetical protein id=14626471 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16951..17349
DNA (399bp) protein (133aa)
hypothetical protein id=14626472 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17379..18365
DNA (987bp) protein (329aa)
methylcobalamin:homocysteine methyltransferase (EC:2.1.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
methylcobalamin:homocysteine methyltransferase (EC:2.1.1.-) id=14626473 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
methylcobalamin:homocysteine methyltransferase (EC:2.1.1.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18362..19363
DNA (1002bp) protein (334aa)
methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14626474 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
methionine synthase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(20439..20831)
DNA (393bp) protein (131aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20951..22462
DNA (1512bp) protein (504aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

23034..23804
DNA (771bp) protein (257aa)
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
diguanylate cyclase id=14626475 bin=bin7_NC10_sister species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24787..25449
DNA (663bp) protein (221aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

25808..28132
DNA (2325bp) protein (775aa)
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
diguanylate cyclase id=14626476 bin=bin7_NC10_sister species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

28129..28923
DNA (795bp) protein (265aa)
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily id=14626477 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
HAD family hydrolase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

28928..29863
DNA (936bp) protein (312aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=14626478 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
thioredoxin reductase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

29877..30212
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Anti-sigma F factor antagonist id=14626479 bin=bin7_NC10_sister species=Actinoplanes friuliensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Anti-sigma F factor antagonist
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

30298..30621
DNA (324bp) protein (108aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(30794..31573)
DNA (780bp) protein (260aa)
L-aspartate dehydrogenase (EC:1.4.1.21); K06989 aspartate dehydrogenase [EC:1.4.1.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Probable L-aspartate dehydrogenase id=4326353 bin=GWF2_Methylomirabilis_70_14 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase, NAD-binding Rossmann fold family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(31573..33096)
DNA (1524bp) protein (508aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Hypothetical conserved protein id=2317443 bin=GWA2_Methylomirabilis_73_35 species=Oceanobacillus iheyensis genus=Oceanobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(33100..33555)
DNA (456bp) protein (152aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Uncharacterized protein id=2317442 bin=GWA2_Methylomirabilis_73_35 species=Oceanobacillus iheyensis genus=Oceanobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(33563..34513)
DNA (951bp) protein (317aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Hypothetical conserved protein id=4555267 bin=GWC2_Methylomirabilis_70_16 species=Oceanobacillus iheyensis genus=Oceanobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

34597..35475
DNA (879bp) protein (293aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4555265 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

35472..36575
DNA (1104bp) protein (368aa)
hypothetical protein; K09760 DNA recombination protein RmuC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative DNA recombination protein id=4226599 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_3105_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

36697..38400
DNA (1704bp) protein (568aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Glr3452 protein id=4555261 bin=GWC2_Methylomirabilis_70_16 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Displaying items 1-30 of 35 in total

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