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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

878..1849
DNA (972bp) protein (324aa)
kpsF; arabinose 5-phosphate isomerase (EC:5.3.1.13) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
kpsF; arabinose 5-phosphate isomerase (EC:5.3.1.13) id=14625762 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
kpsF; arabinose 5-phosphate isomerase (EC:5.3.1.13)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

2755..2994
DNA (240bp) protein (80aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14625760 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2991..3599
DNA (609bp) protein (203aa)
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA id=14625759 bin=bin7_NC10_sister species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lipopolysaccharide transport periplasmic protein LptA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3607..4329
DNA (723bp) protein (241aa)
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=14625758 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4353..5897
DNA (1545bp) protein (515aa)
sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor id=14625757 bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sigma-54 factor RpoN
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6523..7311
DNA (789bp) protein (263aa)
hypothetical protein; K06958 UPF0042 nucleotide-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K06958 UPF0042 nucleotide-binding protein id=14625755 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7304..9442
DNA (2139bp) protein (713aa)
alpha-amylase 1 (EC:3.2.1.1); K07405 alpha-amylase [EC:3.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
alpha-amylase 1 (EC:3.2.1.1)
alpha-amylase/alpha-mannosidase id=14625754 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9512..10663
DNA (1152bp) protein (384aa)
metK; methionine adenosyltransferase (EC:2.5.1.6) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
metK; methionine adenosyltransferase (EC:2.5.1.6) id=14625753 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
metK; methionine adenosyltransferase (EC:2.5.1.6)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10913..12172
DNA (1260bp) protein (420aa)
ahcY; adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ahcY; adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] id=14625752 bin=bin7_NC10_sister species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ahcY; adenosylhomocysteinase (EC:3.3.1.1)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12225..14936
DNA (2712bp) protein (904aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625751 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

15219..15989
DNA (771bp) protein (257aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] id=14627262 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16026..17018
DNA (993bp) protein (331aa)
hmd; coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase id=14627263 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17031..17771
DNA (741bp) protein (247aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] id=14627264 bin=bin7_NC10_sister species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18030..18173)
DNA (144bp) protein (48aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18201..18338)
DNA (138bp) protein (46aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18578..18991
DNA (414bp) protein (138aa)
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
major facilitator superfamily protein id=14627265 bin=bin7_NC10_sister species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
major facilitator superfamily protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

19024..20265
DNA (1242bp) protein (414aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627266 bin=bin7_NC10_sister species=Bradyrhizobium elkanii genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
membrane protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20358..21719
DNA (1362bp) protein (454aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein id=14627267 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sugar ABC transporter substrate-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21801..23495
DNA (1695bp) protein (565aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Probable sugar ABC transporter, permease protein id=3709050 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sugar ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

23511..24605
DNA (1095bp) protein (365aa)
glycerol-3-phosphate ABC transporter ATP-binding protein; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glycerol-3-phosphate ABC transporter ATP-binding protein; K10112 maltose/maltodextrin transport system ATP-binding protein id=14627323 bin=bin7_NC10_sister species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glycerol-3-phosphate ABC transporter ATP-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24704..25912
DNA (1209bp) protein (403aa)
putative exported solute binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative exported solute binding protein id=14627322 bin=bin7_NC10_sister species=Rhizobium sp. genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
exported solute binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

26015..26542
DNA (528bp) protein (176aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627321 bin=bin7_NC10_sister species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tripartite ATP-independent periplasmic transporter, DctQ component
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

26539..27858
DNA (1320bp) protein (440aa)
DctM family transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DctM family transporter id=14627320 bin=bin7_NC10_sister species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DctM family transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

27867..29039
DNA (1173bp) protein (391aa)
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein id=14627319 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter substrate-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

29110..29979
DNA (870bp) protein (290aa)
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=14627318 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

29979..31004
DNA (1026bp) protein (342aa)
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein id=14627317 bin=bin7_NC10_sister species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

31063..31794
DNA (732bp) protein (244aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
branched-chain amino acid transport ATP-binding protein LivG; K01995 branched-chain amino acid transport system ATP-binding protein id=14627316 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

31791..32534
DNA (744bp) protein (248aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein id=14627315 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

32709..33839
DNA (1131bp) protein (377aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627314 bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_5050_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

33940..34329
DNA (390bp) protein (130aa)
id=14627313 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627313 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Displaying items 1-30 of 39 in total

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