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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2..208)
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(205..858)
DNA (654bp) protein (218aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627284 bin=bin7_NC10_sister species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(872..1990)
DNA (1119bp) protein (373aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
btuB; TonB-dependent outer membrane receptor for cobalamin and Fe transport; K02014 iron complex outermembrane recepter protein id=14627283 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
TonB-dependent receptor
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3008..3814)
DNA (807bp) protein (269aa)
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=14627282 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3811..4860)
DNA (1050bp) protein (350aa)
btuC; vitamin B12 import system permease protein BtuC; K02015 iron complex transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
btuC; vitamin B12 import system permease protein BtuC; K02015 iron complex transport system permease protein id=14627281 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
btuC; vitamin B12 import system permease protein BtuC
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4857..5732)
DNA (876bp) protein (292aa)
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein id=14627280 bin=bin7_NC10_sister species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
periplasmic binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5729..7099)
DNA (1371bp) protein (457aa)
cobB; cobyrinic acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Cobyrinic acid A,C-diamide synthase n=2 Tax=Geobacter sulfurreducens RepID=D7AE15_GEOSK
cbiA; cob(II)yrinate a,c-diamide synthase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7096..7929)
DNA (834bp) protein (278aa)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria
cobT; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] id=14627279 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8239..8817)
DNA (579bp) protein (193aa)
cobalbumin biosynthesis protein (EC:2.7.7.62); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_cu
cobalbumin biosynthesis protein (EC:2.7.7.62); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] id=14627278 bin=bin7_NC10_sister species=Thermus aquaticus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
cobalbumin biosynthesis protein (EC:2.7.7.62)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9610..9804)
DNA (195bp) protein (65aa)
id=14627277 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
id=14627277 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9857..10222)
DNA (366bp) protein (122aa)
putative Heat shock protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hslR; Hsp15 family heat shock protein; K04762 ribosome-associated heat shock protein Hsp15 id=14627276 bin=bin7_NC10_sister species=Leucobacter sp. UCD-THU genus=Leucobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
putative Heat shock protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10485..12014
DNA (1530bp) protein (510aa)
protein serine phosphatase with GAF(s) sensor(s) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
protein serine phosphatase with GAF(s) sensor(s) id=14627275 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12475..13671
DNA (1197bp) protein (399aa)
Biotin dependent acyl-CoA carboxylase, putative n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DEI5_9BACI
biotin dependent acyl-CoA carboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
biotin dependent acyl-CoA carboxylase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13699..14388
DNA (690bp) protein (230aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627274 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14385..15038
DNA (654bp) protein (218aa)
id=14627273 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627273 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15067..15489
DNA (423bp) protein (141aa)
hypothetical protein; K15977 putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DoxX family protein; K15977 putative oxidoreductase id=14627272 bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15617..16588)
DNA (972bp) protein (324aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit id=14627271 bin=bin7_NC10_sister species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16588..17565)
DNA (978bp) protein (326aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=14627270 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17699..18310)
DNA (612bp) protein (204aa)
alpha-ribazole phosphatase; K02226 alpha-ribazole phosphatase [EC:3.1.3.73] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
alpha-ribazole phosphatase; K02226 alpha-ribazole phosphatase [EC:3.1.3.73] id=14627269 bin=bin7_NC10_sister species=Desulfotomaculum carboxydivorans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
phosphoglucomutase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18383..19189)
DNA (807bp) protein (269aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] id=14627268 bin=bin7_NC10_sister species=Spirochaeta bajacaliforniensis genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=bin7_NC10_sister organism_group=NC10
cobalamin 5'-phosphate synthase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19153..19554)
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19554..21083)
DNA (1530bp) protein (510aa)
propionyl-CoA carboxylase subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative propionyl-CoA carboxylase beta subunit id=4243671 bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
propionyl-CoA carboxylase subunit beta
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21096..22115)
DNA (1020bp) protein (340aa)
RNA polymerase, sigma-24 subunit, RpoE Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RNA polymerase sigma-E factor id=1709623 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA polymerase, sigma-24 subunit, RpoE
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22184..22654)
DNA (471bp) protein (157aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] id=14627798 bin=bin7_NC10_sister species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
3-dehydroquinate dehydratase (EC:4.2.1.10)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22651..23601)
DNA (951bp) protein (317aa)
response regulator receiver modulated diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
response regulator receiver modulated diguanylate cyclase id=14627799 bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
response regulator receiver modulated diguanylate cyclase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23827..25200)
DNA (1374bp) protein (458aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625061 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(25332..26459)
DNA (1128bp) protein (376aa)
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease id=14625062 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(26601..27650)
DNA (1050bp) protein (350aa)
ABC transporter ATP-binding protein (EC:3.6.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter ATP-binding protein (EC:3.6.3.-) id=14625063 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein (EC:3.6.3.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(27647..28807)
DNA (1161bp) protein (387aa)
secretion protein HlyD; K01993 HlyD family secretion protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
secretion protein HlyD; K01993 HlyD family secretion protein id=14625064 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
secretion protein HlyD
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14452_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(28812..30149)
DNA (1338bp) protein (446aa)
Zn-dependent protease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Zn-dependent protease id=14625065 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Zn-dependent protease
Displaying items 1-30 of 41 in total

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