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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2..886
DNA (885bp) protein (295aa)
Polyferredoxin, heterodixulfide reductase subunit A n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4BZM1_DESTA
polyferredoxin, heterodixulfide reductase subunit A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
polyferredoxin, heterodixulfide reductase subunit A
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1727..2020)
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2171..3094
DNA (924bp) protein (308aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Caloramator australicus RC3 RepID=I7K8Q8_9CLOT
electron transfer flavoprotein alpha-subunit; K03522 electron transfer flavoprotein alpha subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
electron transfer flavoprotein alpha-subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3091..3876
DNA (786bp) protein (262aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QQN8_VULDI
electron transfer flavoprotein subunit alpha/beta; K03521 electron transfer flavoprotein beta subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
electron transfer flavoprotein subunit alpha/beta
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3873..4145
DNA (273bp) protein (91aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14628029 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4675..5109)
DNA (435bp) protein (145aa)
copper resistance D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
copper resistance D id=14628033 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
copper resistance D domain protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5114..5818)
DNA (705bp) protein (235aa)
transcriptional regulator, Crp/Fnr family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
transcriptional regulator, Crp/Fnr family id=14628034 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
transcriptional regulator, Crp/Fnr family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5900..6598
DNA (699bp) protein (233aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14628035 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6966..7982
DNA (1017bp) protein (339aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54) Tax=RIFCSPLOWO2_02_F
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54) id=14628036 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9354..9788
DNA (435bp) protein (145aa)
TonB family protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TonB family protein id=4178154 bin=GWC2_Methylomirabilis_70_16 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TonB family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9794..11311
DNA (1518bp) protein (506aa)
putative 5`-nucleotidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
5'-nucleotidase id=4178156 bin=GWC2_Methylomirabilis_70_16 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative 5`-nucleotidase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_trna_1
unknown

Not on your lists

11360..11431
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11487..13274
DNA (1788bp) protein (596aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=14627871 bin=bin7_NC10_sister species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
threonyl-tRNA synthetase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13485..13823
DNA (339bp) protein (113aa)
infC; translation initiation factor IF-3 id=14627870 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
translation initiation factor IF-3
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


13834..14031
DNA (198bp) protein (66aa)
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 id=14627869 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L35
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


14145..14504
DNA (360bp) protein (120aa)
rplT; 50S ribosomal protein L20 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rplT; 50S ribosomal protein L20 id=14627868 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rplT; 50S ribosomal protein L20
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


14494..15576
DNA (1083bp) protein (361aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] id=14627867 bin=bin7_NC10_sister species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Phenylalanyl-tRNA synthetase subunit alpha
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15615..18011
DNA (2397bp) protein (799aa)
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] id=14627866 bin=bin7_NC10_sister species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
pheT; phenylalanyl-tRNA synthetase subunit beta
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18080..18346
DNA (267bp) protein (89aa)
id=14627865 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627865 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18343..18639
DNA (297bp) protein (99aa)
putative cell division protein ZapA; K09888 cell division protein ZapA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4039893 bin=GWC2_Methylomirabilis_70_24 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative cell division protein ZapA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18702..19118
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Uncharacterized protein id=3970886 bin=GWC2_Methylomirabilis_70_16 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

19115..19462
DNA (348bp) protein (116aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Uncharacterized protein id=4306187 bin=GWA2_Methylomirabilis_73_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

19897..21456
DNA (1560bp) protein (520aa)
phosphodiesterase; K06950 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Ribonuclease Y id=4039892 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phosphodiesterase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7837_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21453..22100
DNA (648bp) protein (216aa)
ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase; K09769 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
2',3'-cyclic nucleotide 2'-phosphodiesterase id=4039891 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2',3'-cyclic-nucleotide 2'-phosphodiesterase
Displaying 24 items

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