ggKbase home page

RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

525..965
DNA (441bp) protein (147aa)
AsmA family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
AsmA family protein id=14627703 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
AsmA family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

965..1903
DNA (939bp) protein (313aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=14627702 bin=bin7_NC10_sister species=Thermanaerovibrio velox genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin7_NC10_sister organism_group=NC10
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

1896..2732
DNA (837bp) protein (279aa)
ABC transporter permease; K02034 peptide/nickel transport system permease protein id=14627701 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

2928..3044
DNA (117bp) protein (39aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14627700 bin=bin7_NC10_sister species=Thauera sp. 27 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3041..3451
DNA (411bp) protein (137aa)
PilT domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PilT domain-containing protein id=24517337 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PilT domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3979..4947
DNA (969bp) protein (323aa)
thioesterase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
thioesterase superfamily protein id=14626990 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
thioesterase superfamily protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4991..5743
DNA (753bp) protein (251aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626991 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5829..6245
DNA (417bp) protein (139aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] id=14626992 bin=bin7_NC10_sister species=Rhodopirellula sp. SWK7 genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6242..6895
DNA (654bp) protein (218aa)
DNA recombination protein RuvA domain I; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DNA recombination protein RuvA domain I; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] id=14626993 bin=bin7_NC10_sister species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA recombination protein RuvA domain I
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6871..8472)
DNA (1602bp) protein (534aa)
Radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Radical SAM domain-containing protein id=14626994 bin=bin7_NC10_sister species=Amycolatopsis sp. ATCC 39116 genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Radical SAM domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24770_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8483..8698)
DNA (216bp) protein (72aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626995 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Displaying 11 items

View Taxonomy