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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2..88)
DNA (87bp) protein (29aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

141..1319
DNA (1179bp) protein (393aa)
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member id=14626746 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1392..1925
DNA (534bp) protein (178aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K08999 hypothetical protein id=14626745 bin=bin7_NC10_sister species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2358..2624)
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3103..3432
DNA (330bp) protein (110aa)
4-hydroxybenzoyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
4-hydroxybenzoyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] id=14626743 bin=bin7_NC10_sister species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
4-hydroxybenzoyl-CoA thioesterase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3422..5053
DNA (1632bp) protein (544aa)
Formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] id=14626742 bin=bin7_NC10_sister species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5237..6196
DNA (960bp) protein (320aa)
ABC transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter id=14626741 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6196..6963
DNA (768bp) protein (256aa)
multi-copper enzyme maturation ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
multi-copper enzyme maturation ABC transporter permease id=14626740 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
multi-copper enzyme maturation ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6967..8538
DNA (1572bp) protein (524aa)
gliding motility ABC transporter auxillary protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
gliding motility ABC transporter auxillary protein id=14626739 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
gliding motility ABC transporter auxillary protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8774..10546
DNA (1773bp) protein (591aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626738 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10611..11282
DNA (672bp) protein (224aa)
Beta-lactamase-like Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Beta-lactamase-like id=14626737 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Beta-lactamase-like
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11723..12199
DNA (477bp) protein (159aa)
diacylglycerol kinase catalytic subunit; K07029 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
diacylglycerol kinase catalytic-domain containing protein; K07029 id=14626736 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Transcription regulator
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12304..13080)
DNA (777bp) protein (259aa)
oxidoreductase, short chain dehydrogenase/reductase family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
oxidoreductase, short chain dehydrogenase/reductase family id=14626735 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
short chain dehydrogenase/reductase family oxidoreductase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13090..13800
DNA (711bp) protein (237aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626734 bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13646..14335)
DNA (690bp) protein (230aa)
hypothetical protein; K07018 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K07018 id=14626733 bin=bin7_NC10_sister species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14435..14968
DNA (534bp) protein (178aa)
id=14626732 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626732 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14965..15339
DNA (375bp) protein (125aa)
id=14626731 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626731 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15381..15584)
DNA (204bp) protein (68aa)
Tol-Pal system YbgF Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Tol-Pal system YbgF id=14626730 bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16238..16828)
DNA (591bp) protein (197aa)
OmpA/MotB domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
OmpA/MotB domain protein id=14626729 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
OmpA/MotB domain protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16886..17962)
DNA (1077bp) protein (359aa)
Xaa-Pro aminopeptidase-like protein; K03641 TolB protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
WD40 domain-containing protein; K03641 TolB protein id=14626728 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
translocation protein TolB
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18117..18716
DNA (600bp) protein (200aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18898..19335)
DNA (438bp) protein (146aa)
tolR protein; K03560 biopolymer transport protein TolR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tolR; protein TolR; K03560 biopolymer transport protein TolR id=14626726 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
tolR protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19325..20062)
DNA (738bp) protein (246aa)
tolQ protein; K03562 biopolymer transport protein TolQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tolQ protein; K03562 biopolymer transport protein TolQ id=14626725 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
flagellar motor protein MotA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20163..20957
DNA (795bp) protein (265aa)
id=14626724 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626724 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20957..21739
DNA (783bp) protein (261aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-) id=14626723 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21741..22517
DNA (777bp) protein (259aa)
beta-lactamase domain-containing protein; K00784 ribonuclease Z [EC:3.1.26.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
beta-lactamase domain-containing protein; K00784 ribonuclease Z [EC:3.1.26.11] id=14626722 bin=bin7_NC10_sister species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
beta-lactamase domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22525..23829)
DNA (1305bp) protein (435aa)
thrC-like; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] id=14626721 bin=bin7_NC10_sister species=Frankia sp. QA3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
thrC-like; threonine synthase (EC:4.2.3.1)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_22715_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24585..24770
DNA (186bp) protein (62aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=2773072 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 28 items

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