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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3..1307
DNA (1305bp) protein (435aa)
branched chain amino acid ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
livK; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein id=14625571 bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
branched chain amino acid ABC transporter substrate-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1377..3626
DNA (2250bp) protein (750aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=14625570 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3672..4547
DNA (876bp) protein (292aa)
livH-3; branched-chain amino acid ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
livH-3; branched-chain amino acid ABC transporter permease id=14625569 bin=bin7_NC10_sister species=Natrinema versiforme genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
livH-3; branched-chain amino acid ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4544..5521
DNA (978bp) protein (326aa)
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14625568 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

5523..6278
DNA (756bp) protein (252aa)
livG3; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
livG3; branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein id=14625567 bin=bin7_NC10_sister species=Haloferax denitrificans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC transporter ATP-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6281..6997
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter ATP-binding protein id=14625566 bin=bin7_NC10_sister species=Bordetella parapertussis genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7681..9516
DNA (1836bp) protein (612aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] id=14625564 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9560..11209
DNA (1650bp) protein (550aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] id=14625563 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11278..12546
DNA (1269bp) protein (423aa)
braC; Leu/Ile/Val-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
braC; Leu/Ile/Val-binding protein id=14625562 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
braC; Leu/Ile/Val-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12509..13102)
DNA (594bp) protein (198aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625561 bin=bin7_NC10_sister species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

13601..14467
DNA (867bp) protein (289aa)
braD; branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein id=14625559 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
braD; branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
braD; branched chain amino acid ABC transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14604..15557
DNA (954bp) protein (318aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14625558 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15554..16285
DNA (732bp) protein (244aa)
LivG-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
LivG-like protein; K01995 branched-chain amino acid transport system ATP-binding protein id=14625557 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
LivG-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16358..17071
DNA (714bp) protein (238aa)
braG; high-affinity branched-chain amino acid transport ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
braG; high-affinity branched-chain amino acid transport ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein id=14625556 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
braG; high-affinity branched-chain amino acid transport ATP-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17108..17779)
DNA (672bp) protein (224aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625555 bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18143..18274)
DNA (132bp) protein (44aa)
id=14625554 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
id=14625554 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18292..18684)
DNA (393bp) protein (131aa)
Response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Response regulator receiver protein id=14625553 bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Response regulator receiver protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_40500_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19068..20171)
DNA (1104bp) protein (368aa)
two component sigma-54 specific Fis family transcriptional regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=14625552 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
two component sigma-54 specific Fis family transcriptional regulator
Displaying 18 items

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