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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

663..2135
DNA (1473bp) protein (491aa)
FAD linked oxidase domain-containing protein; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15) id=14625308 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
FAD linked oxidase domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2140..3474
DNA (1335bp) protein (445aa)
FAD linked oxidase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
FAD linked oxidase-like protein id=14625309 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
FAD linked oxidase-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3489..4820
DNA (1332bp) protein (444aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625310 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4826..5344
DNA (519bp) protein (173aa)
moaB; molybdenum cofactor biosynthesis protein B; K03638 molybdenum cofactor biosynthesis protein B Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
moaB; molybdenum cofactor biosynthesis protein B; K03638 molybdenum cofactor biosynthesis protein B id=14625311 bin=bin7_NC10_sister species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
moaB; molybdenum cofactor biosynthesis protein B
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

5403..6521
DNA (1119bp) protein (373aa)
trypsin-like serine protease; K01362 [EC:3.4.21.-] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
trypsin-like serine protease; K01362 [EC:3.4.21.-] id=14625312 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
degP; periplasmic trypsin-like serine protease DegP
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6658..7023)
DNA (366bp) protein (122aa)
id=14625313 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625313 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7129..7413)
DNA (285bp) protein (95aa)
UBA/THIF-type NAD/FAD binding protein; K11996 adenylyltransferase and sulfurtransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
UBA/THIF-type NAD/FAD binding protein; K11996 adenylyltransferase and sulfurtransferase id=14625314 bin=bin7_NC10_sister species=Nocardiopsis chromatogenes genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
UBA/THIF-type NAD/FAD binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7459..8379)
DNA (921bp) protein (307aa)
moeB1; molybdopterin biosynthesis protein MoeB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
moeB1; molybdopterin biosynthesis protein MoeB id=14625315 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
moeB1; molybdopterin biosynthesis protein MoeB
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8511..9572
DNA (1062bp) protein (354aa)
strD; glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) (EC:2.7.7.24) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curate
strD; glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) (EC:2.7.7.24) id=14625316 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
strD; glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) (EC:2.7.7.24)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9592..10128
DNA (537bp) protein (179aa)
putative dTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative dTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] id=14625317 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=bin7_NC10_sister organism_group=NC10
putative dTDP-4-dehydrorhamnose 3,5-epimerase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10138..11112
DNA (975bp) protein (325aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=14625318 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dTDP-glucose 4,6-dehydratase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11136..11987
DNA (852bp) protein (284aa)
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] id=14625319 bin=bin7_NC10_sister species=Methanothermus fervidus genus=Methanothermus taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12016..13032
DNA (1017bp) protein (339aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PDZ/DHR/GLGF domain-containing protein id=14625320 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13037..14440
DNA (1404bp) protein (468aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625321 bin=bin7_NC10_sister species=Smithella sp. ME-1 genus=Smithella taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_15
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

14457..15008
DNA (552bp) protein (184aa)
id=14625322 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
id=14625322 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15000..16787)
DNA (1788bp) protein (596aa)
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:4.1.1.70) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:4.1.1.70) id=14625323 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:4.1.1.70)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16805..17968)
DNA (1164bp) protein (388aa)
acyl-CoA dehydrogenase (EC:1.3.99.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
acyl-CoA dehydrogenase (EC:1.3.99.2) id=14625324 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acyl-CoA dehydrogenase (EC:1.3.99.2)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_18
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

18180..18407
DNA (228bp) protein (76aa)
methylmalonyl-CoA decarboxylase, subunit gamma Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
methylmalonyl-CoA decarboxylase, subunit gamma id=14625325 bin=bin7_NC10_sister species=Carnobacterium sp. AT7 genus=Carnobacterium taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methylmalonyl-CoA decarboxylase, subunit gamma
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18417..18566
DNA (150bp) protein (50aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=4549118 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18559..19695
DNA (1137bp) protein (379aa)
mmdB; putative methylmalonyl-CoA decarboxylase beta-subunit (EC:4.1.1.41); K01572 oxaloacetate decarboxylase, beta subunit [EC:4.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
mmdB; putative methylmalonyl-CoA decarboxylase beta-subunit (EC:4.1.1.41); K01572 oxaloacetate decarboxylase, beta subunit [EC:4.1.1.3] id=14625326 bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
mmdB; putative methylmalonyl-CoA decarboxylase beta-subunit (EC:4.1.1.41)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

19974..21206
DNA (1233bp) protein (411aa)
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
major facilitator superfamily protein id=14625327 bin=bin7_NC10_sister species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator superfamily protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21182..21586)
DNA (405bp) protein (135aa)
putative glyoxalase; K07104 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative glyoxalase; K07104 id=14625328 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative glyoxalase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21614..22828
DNA (1215bp) protein (405aa)
fosmidomycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
fosmidomycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein id=14625329 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
fosmidomycin resistance protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

22884..23681
DNA (798bp) protein (266aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] id=14625330 bin=bin7_NC10_sister species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin7_NC10_sister organism_group=NC10
tRNA (adenine-N(1)-)-methyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

23674..25059
DNA (1386bp) protein (462aa)
xanthine/uracil/vitamin C permease; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Xanthine/uracil/vitamin C permease id=4433398 bin=GWC2_Methylomirabilis_70_16 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
xanthine/uracil/vitamin C permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

25105..27162
DNA (2058bp) protein (686aa)
peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] id=14625333 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

27156..27404
DNA (249bp) protein (83aa)
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein id=14625334 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_8526_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(27513..28919)
DNA (1407bp) protein (469aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625335 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Displaying 28 items

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