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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1..1125
DNA (1125bp) protein (375aa)
thiol-disulfide oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
thiol-disulfide oxidoreductase domain-containing protein id=14627159 bin=bin7_NC10_sister species=Sulfitobacter sp. EE-36 genus=Sulfitobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
thiol-disulfide oxidoreductase domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1321..1521
DNA (201bp) protein (67aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) id=14627158 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
cold-shock DNA-binding domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1613..2722
DNA (1110bp) protein (370aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] id=14627157 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DEAD/DEAH box helicase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

2957..3157
DNA (201bp) protein (67aa)
cold shock DNA/RNA-binding protein; K03704 cold shock protein (beta-ribbon, CspA family) id=14627156 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
cold shock DNA/RNA-binding protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
cold shock DNA/RNA-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3616..3921)
DNA (306bp) protein (102aa)
competence protein ComEA; K02237 competence protein ComEA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
competence protein ComEA; K02237 competence protein ComEA id=14627155 bin=bin7_NC10_sister species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
competence protein ComEA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4079..4315
DNA (237bp) protein (79aa)
id=14627154 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627154 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4316..4603
DNA (288bp) protein (96aa)
carboxymuconolactone decarboxylase family protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
carboxymuconolactone decarboxylase family protein id=14627153 bin=bin7_NC10_sister species=Novosphingobium sp. PP1Y genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
carboxymuconolactone decarboxylase family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4645..5340)
DNA (696bp) protein (232aa)
id=14627152 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627152 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(5495..5914)
DNA (420bp) protein (140aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14627151 bin=bin7_NC10_sister species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5911..6222)
DNA (312bp) protein (104aa)
HNH endonuclease family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
HNH endonuclease family protein id=14627150 bin=bin7_NC10_sister species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
HNH endonuclease family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6232..6627)
DNA (396bp) protein (132aa)
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein id=14627149 bin=bin7_NC10_sister species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_12
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(6629..6736)
DNA (108bp) protein (36aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6788..6976)
DNA (189bp) protein (63aa)
id=14627148 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627148 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6989..7492)
DNA (504bp) protein (168aa)
id=14627147 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627147 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7497..9047)
DNA (1551bp) protein (517aa)
drug resistance transporter, EmrB/QacA subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
drug resistance transporter, EmrB/QacA subfamily id=14627146 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
drug resistance transporter, EmrB/QacA subfamily
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9044..9964)
DNA (921bp) protein (307aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DNA-3-methyladenine glycosylase II (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] id=14627145 bin=bin7_NC10_sister species=Paenibacillus terrigena genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10184..11047
DNA (864bp) protein (288aa)
carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:2.7.8.23) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Dml; 2,3-dimethylmalate lyase (EC:4.1.3.32) id=14627144 bin=bin7_NC10_sister species=Sporomusa ovata genus=Sporomusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Dml; 2,3-dimethylmalate lyase (EC:4.1.3.32)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_24518_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11044..11832
DNA (789bp) protein (263aa)
CaiD; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55); K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
CaiD; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
id=14627143 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Displaying 18 items

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