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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_12

Organism: Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19

near complete RP 50 / 55 MC: 2 BSCG 48 / 51 ASCG 11 / 38
Location: 8945..12184

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2097
  • Evalue 0.0
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) id=14625927 bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 999.99
  • Bit_score: 2080
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 999.99
  • Bit_score: 822
  • Evalue 1.00e-235

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Taxonomy

R_Rokubacteria_68_19 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 3240
ATGGCTGTGCCCGTCCAACCCTTCCTGCTCGCCCAGTGGGCCCCGTTTCAGGCGTTCGCGGGGGCCTTCGCCGAGGGAGATCCCTGTCTTCGCGTGGACGGCCTCTGGGGATCGTCGCGCTCGCTGGTGGCCGCCGCGCTCCTTCGGGAGACCGGCCACCCGGCCCTGGTCGTGGTCGGCGACCGCTCCGGGCTCGACCGGATGTGCCGGGACCTCCGCTTCTTCGAGCAGGCCCTGGACGTTCCGTCGCGGCTGGCGGTCGAGTTCCCGCCGGGGCAGCCCGCGTTCTGGCGGGGCCGTCCCCAGCGGGAAGAGGCGGGGGAGCGGGCGTGGGTGTGCCACCGCCTGCTCCGCGGAGAGCCGCTGACCGTCGTCACACTTCCCGCGGCGCTGACCTCGCCCCTTCCGCCGCCCGACGACTTCCGCCGCCTCACCTTCGGCCTCAGGGTGCAAGGGGAGCTCGCGCGAGACGAGCTGCTGGAGCGCCTGGAGGCCGCGGGGTACGCGCGGGTGGAAACGGTCGTGGAGGTGGGGCAGTGGAGCCTCCGCGGCGGGATCGTGGACATCTTCTCCCCCGCGCGGGAGCGGCCGGTGCGCGTGGAGTTCTTCGGGGACGAGGTCGAGTCGGTTCGTCTCTTCGATCCGACCTCCCAGCGGTCGCTCGAGACGCTCGAGTCCGTCGAGGTGCTGCCGCTGTCCGACGGGCAGGGCGGGGGGGCCACGCTGCTGACGTACCTCGGTGCGGACGCGCCGGTGATCCTGGACGACCCGGCCCTCCTGGAGGGCCCGCGGGACGAGGCGCCGTCCGCGATCCCGCTCGCCGAGCTCCTGGCCGGGCGCCAGCGGGTGGAGCTGGGGCTCCTGCCCGTCGCCGCGCCGGATCCCTCGGCGAGGCGCTTCACCCTCGACGTGCGGTCGGTCGGGAGCTTCCGCGGACAGTTCCGCCAGCTGGCCGCCGACCTCGTCGAGTGGCTCCGCGAGGGTTTCCGGGTCCGGCTGGTGGTTCAGGATGAGGCCCAGGCCCACCGCCTGAAGCAGATCCTCCGGGAGCACGCCCTCGAGGCCGCCGCCGACGCGTCGCTCGGGAGCCCGGAGGGGCTTGGCATCCTGGTCGGCGAGTGCTCTCAGGGGTTCGCGGTCCCTGCCCTTGGCTCGATCCTTCTCACCGAGGAGGAGCTCTTCGGCGCCCGGCGGCGGACCCTCCGCCGGCCGCGGTTCCAGCGGGGGGCCGCCGTCACGGCGTTCACGGACCTCGAGGTGGGCGATCTCGTGGTTCACGAAGAGCACGGGATCGGCCGCTACCTCGGCCTGAAGACCCTTTCCGTGGATGACCGGCAGGGCGATTTTCTCCTCCTCGAATATGCGGAGGGGAGCCGTCTCTACCTGCCCGTCGAGCGCCTGAGCGTCATCTCGAAGTATGCGGGGGCCGACGGCGCCGCCACGCGGCTGGATCGGCTGGGCGGGACTTCGTGGCAGCGAGTAAAGGAGTCCGTGAGGGCGGCGCTCCGCCAGATGGCCGAGGAGCTGCTCCGGCTCTACGCTGCCCGCTCGGTGCTGGACGGTCATCTCTTCGGCCCGGACGCCCCCTGGCAGCGGGAGTTCGAGGCGGCGTTCCGCTTCGAGGAGACCCCCGATCAGCTCCGCGCCATCGAGGAGGTCAAGGCCGACATGGAGAAGCCCCGCCCCATGGATCGCCTGGTCGCGGGCGACGTGGGTTACGGCAAGACGGAGGTCGCCCTCCGGGCCGCGTTCAAGGCCGCGATGGACGGCAAGCAGGTCGCGCTTTTGGCGCCGACGACGATCCTGGCCCAGCAACACTGGGCGACCTTCACTGAGCGGTTCGCGCCGTTCCCGCTGCGGGTGGAGCTGCTCTCCCGTTTCCGTTCGCCGAAGGAGCAGAAGGCCGTGGTGGCGGGGCTCCGCCAGGGAACGGTGGACGTGGTGATCGGGACCCACCGCCTGCTCTCCCGGGACGTCGCTTTCCTGGACCTGGGGCTCCTCATCGTGGACGAGGAGCACCGCTTCGGCGTGGCCCACAAGGAGCGGATCAAGCAGATCAGAAAGTCCGTGGATGTCCTGGCCCTGACGGCGACCCCGATCCCGCGGACGCTCTACATGTCCCTGTCGGGGATCCGGGATCTGTCGGTCATCGAAACGCCTCCGCTGGACCGCCTGCCCGTGGAAACCGCGGTTTGCCCCTTCAGCCGGCAGCTGATCCGCGAGGCGCTCGAGCGCGAGCTGGCCCGGGGCGGCCAGGTCTTCTTCGTCCACAACCGCGTGCAGTCCCTGCCCTCCATGACGGCGTTCATCCAGCGGCTCCACCCGCGGGCTCGCGTCGTGATGGCCCACGGCCAGATGCGGGAAAAGGACTTGGAGAACGTCATGCTGCGCTTCGTCGGCGGCCAGGCCGACGTGCTGGTCTCCACGGCCATCGTCGAGTCCGGCCTCGACATCCCGGCCTCCAACACCATCATCCTGAACCGGGCGGACCGCTTCGGCCTCGCCCAGCTCTACCAGTTGCGGGGACGCGTGGGCCGGGAGCGCCAGCAGGCGTACGCCTATCTGTTGATCCCCGCCGACGGCCGGATCGACGACACGGCCCAGAAGCGGCTCCGCGTGATCCAGGAACTCACGGAGCTCGGCTCGGGCTTCCGGCTGGCGCTCCGGGACCTCGAAATCCGCGGGGCGGGCAATCTGCTGGGCTCCCAGCAGCACGGGCACATCGCGGCCGTCGGGTTCGATTTGTATTCGAAGCTCCTGGCCGAGGCCGTGAGAGAATTGACGGGGGACGTGCCCCCGGAGGCCCCCGAGCCCCTGGTGACCGTGGAGGTCGAAGCGCTGCTGCCCGAGAGTTACGTGCCGGAGGTGGCCCAGCGGCTGGCGCTGTACAAGCGGCTCGCCGGGATGACGCGCGTGGAGGAGGTCGCCGAGATCCGCTCCGAGCTCCGGGATCGCTTCGGGCCTCTCCCGCCCCCGGTCGTCCACCTCCTGGAGGTCGTGGAGATCCGGATCGCGGCGCGTGCCCTGGGCATCGAGCGGCTGGAGGCGGTCGGGGGGAGGGCGGTCGTCACGTTCGCGCCGTCCACGCCGGTGTCGGCGGAGCGGCTGGTGCGCGCCGCCAGCGCCGAGCCCGGCCGGCTGCGCCTCAGGAAGGAGTTCGTCGTCGAGGCCCCGATCCCGCGCGGGCCGTGGTCGGCGGTGCGAGGGGCCCTCGCCGAGTTTCTGGGAACCCTCCGATGA
PROTEIN sequence
Length: 1080
MAVPVQPFLLAQWAPFQAFAGAFAEGDPCLRVDGLWGSSRSLVAAALLRETGHPALVVVGDRSGLDRMCRDLRFFEQALDVPSRLAVEFPPGQPAFWRGRPQREEAGERAWVCHRLLRGEPLTVVTLPAALTSPLPPPDDFRRLTFGLRVQGELARDELLERLEAAGYARVETVVEVGQWSLRGGIVDIFSPARERPVRVEFFGDEVESVRLFDPTSQRSLETLESVEVLPLSDGQGGGATLLTYLGADAPVILDDPALLEGPRDEAPSAIPLAELLAGRQRVELGLLPVAAPDPSARRFTLDVRSVGSFRGQFRQLAADLVEWLREGFRVRLVVQDEAQAHRLKQILREHALEAAADASLGSPEGLGILVGECSQGFAVPALGSILLTEEELFGARRRTLRRPRFQRGAAVTAFTDLEVGDLVVHEEHGIGRYLGLKTLSVDDRQGDFLLLEYAEGSRLYLPVERLSVISKYAGADGAATRLDRLGGTSWQRVKESVRAALRQMAEELLRLYAARSVLDGHLFGPDAPWQREFEAAFRFEETPDQLRAIEEVKADMEKPRPMDRLVAGDVGYGKTEVALRAAFKAAMDGKQVALLAPTTILAQQHWATFTERFAPFPLRVELLSRFRSPKEQKAVVAGLRQGTVDVVIGTHRLLSRDVAFLDLGLLIVDEEHRFGVAHKERIKQIRKSVDVLALTATPIPRTLYMSLSGIRDLSVIETPPLDRLPVETAVCPFSRQLIREALERELARGGQVFFVHNRVQSLPSMTAFIQRLHPRARVVMAHGQMREKDLENVMLRFVGGQADVLVSTAIVESGLDIPASNTIILNRADRFGLAQLYQLRGRVGRERQQAYAYLLIPADGRIDDTAQKRLRVIQELTELGSGFRLALRDLEIRGAGNLLGSQQHGHIAAVGFDLYSKLLAEAVRELTGDVPPEAPEPLVTVEVEALLPESYVPEVAQRLALYKRLAGMTRVEEVAEIRSELRDRFGPLPPPVVHLLEVVEIRIAARALGIERLEAVGGRAVVTFAPSTPVSAERLVRAASAEPGRLRLRKEFVVEAPIPRGPWSAVRGALAEFLGTLR*