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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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1..684
DNA (684bp) protein (228aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] id=14625917 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glycerophosphoryl diester phosphodiesterase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

681..2180
DNA (1500bp) protein (500aa)
glpK; glycerol kinase (EC:2.7.1.30) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glpK; glycerol kinase (EC:2.7.1.30) id=14625918 bin=bin7_NC10_sister species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
glycerol kinase (EC:2.7.1.30)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2201..3331
DNA (1131bp) protein (377aa)
extracellular solute-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
extracellular solute-binding protein id=14625919 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
extracellular solute-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3362..3967
DNA (606bp) protein (202aa)
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein id=14625920 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3907..4374
DNA (468bp) protein (156aa)
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein id=14625920 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4527..6233
DNA (1707bp) protein (569aa)
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein id=14625921 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6349..6582
DNA (234bp) protein (78aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625922 bin=bin7_NC10_sister species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6569..6940
DNA (372bp) protein (124aa)
id=14625923 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625923 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6945..7697
DNA (753bp) protein (251aa)
ATP synthase subunit A (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ATP synthase subunit A (EC:3.6.3.14) id=14625924 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ATP synthase subunit A (EC:3.6.3.14)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7729..8052
DNA (324bp) protein (108aa)
ATP synthase f0 subcomplex c subunit; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ATP synthase f0 subcomplex c subunit; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] id=14625925 bin=bin7_NC10_sister species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
ATP synthase f0 subcomplex c subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8101..8751
DNA (651bp) protein (217aa)
rex; redox-sensing transcriptional repressor rex Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rex; redox-sensing transcriptional repressor rex id=14625926 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rex; redox-sensing transcriptional repressor rex
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8945..12184
DNA (3240bp) protein (1080aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) id=14625927 bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
transcription-repair coupling factor
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12328..13449
DNA (1122bp) protein (374aa)
PpiC-type peptidylprolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PpiC-type peptidylprolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] id=14625928 bin=bin7_NC10_sister species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
PpiC-type peptidylprolyl cis-trans isomerase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13669..14922
DNA (1254bp) protein (418aa)
rho; transcription termination factor Rho Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rho; transcription termination factor Rho id=14625929 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
rho; transcription termination factor Rho
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


15079..15294
DNA (216bp) protein (72aa)
50S ribosomal protein L31 id=14625930 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L31 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
50S ribosomal protein L31
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15459..15899
DNA (441bp) protein (147aa)
peptide chain release factor 1 (bRF-1); K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
peptide chain release factor 1; K02835 peptide chain release factor 1 id=14625931 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
peptide chain release factor 1 (bRF-1)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15856..16446
DNA (591bp) protein (197aa)
prfA; peptide chain release factor 1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
peptide chain release factor 1; K02835 peptide chain release factor 1 id=14625931 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
prfA; peptide chain release factor 1
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16763..17326
DNA (564bp) protein (188aa)
hemK; peptide chain release factor methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] id=14625932 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hemK; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17326..18582
DNA (1257bp) protein (419aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1) (EC:2.5.1.7) id=14625933 bin=bin7_NC10_sister species=Sutterella sp. CAG:397 genus=Sutterella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

19394..20530
DNA (1137bp) protein (379aa)
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] id=14625935 bin=bin7_NC10_sister species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
histidinol dehydrogenase (EC:1.1.1.23)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20527..21147
DNA (621bp) protein (207aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] id=14625936 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

21153..21767
DNA (615bp) protein (205aa)
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] id=14625937 bin=bin7_NC10_sister species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=CSP1_6_Rokubacteria
hisH; imidazole glycerol phosphate synthase subunit HisH
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21767..22489
DNA (723bp) protein (241aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase id=14625938 bin=bin7_NC10_sister species=Acinetobacter nectaris genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

22483..23286
DNA (804bp) protein (268aa)
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hisF; imidazole glycerol phosphate synthase cyclase subunit (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] id=14625939 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_18692_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

23283..23912
DNA (630bp) protein (210aa)
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] Tax=RIFCSPLOWO2_02_FULL_
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein hisIE id=4831887 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Displaying 25 items

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