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RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_1
R_WOR_1_46_20, WOR-1, Bacteria

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comp(53..1384)
DNA (1332bp) protein (444aa)
ADP-heptose--LPS heptosyltransferase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ADP-heptose:LPS heptosyltransferase id=4426134 bin=GWF2_OP9_related_35_9 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
ADP-heptose--LPS heptosyltransferase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1381..2376)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMH7_9FIRM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(2373..3410)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z3S4_CYAAP
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(3407..4147)
DNA (741bp) protein (247aa)
ybfF1; group 2 glycosyl transferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1P2_9BACT
ybfF1; group 2 glycosyl transferase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(4151..5662)
DNA (1512bp) protein (504aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RDT7_9CYAN
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(5655..6524)
DNA (870bp) protein (290aa)
lipid A biosynthesis lauroyl acyltransferase (EC:2.3.1.-); K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
lipid A biosynthesis lauroyl acyltransferase (EC:2.3.1.-)
Lipid A biosynthesis acyltransferase id=2256133 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(6521..8242)
DNA (1722bp) protein (574aa)
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (EC:3.6.3.44)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IKV5_9FIRM
ABC-type multidrug transport system, ATPase and permease component Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(8217..9329)
DNA (1113bp) protein (371aa)
lipid A disaccharide synthetase-like protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Putative lipid-A-disaccharide synthase id=3998870 bin=GWF2_OP9-related_38_17 species=Synechocystis sp. PCC 7509 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
lipid A disaccharide synthetase-like protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(9322..10500)
DNA (1179bp) protein (393aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein id=7200783 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(10505..11554)
DNA (1050bp) protein (350aa)
threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S0F4_DESTD
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


11626..12873
DNA (1248bp) protein (416aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
histidyl-tRNA synthetase (EC:6.1.1.21)
histidyl-tRNA synthetase n=1 Tax=Orenia marismortui RepID=UPI000382D454
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

12873..13067
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


13037..14800
DNA (1764bp) protein (588aa)
aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFV3_9FIRM
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

14815..16092
DNA (1278bp) protein (426aa)
PurA; adenylosuccinate synthetase; K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000361AA59
PurA; adenylosuccinate synthetase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(16384..17403)
DNA (1020bp) protein (340aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(17530..18549)
DNA (1020bp) protein (340aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KIQ0_CYAP7
delta-1-pyrroline-5-carboxylate dehydrogenase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(18623..19576)
DNA (954bp) protein (318aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

19630..20274
DNA (645bp) protein (215aa)
exsB; exsB protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
7-cyano-7-deazaguanine synthase id=2050200 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
exsB; exsB protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

20282..21100
DNA (819bp) protein (273aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Uncharacterized protein id=3947540 bin=GWF2_OP9_related_35_9 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

21097..21987
DNA (891bp) protein (297aa)
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin kinase and FAD synthetase id=4854264 bin=GWC2_Nitrospirae-rel_56_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


22021..22287
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YEA4_ANEAE
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
rpsO; 30S ribosomal protein S15
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3410_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

22284..22682
DNA (399bp) protein (133aa)
pnp; polynucleotide phosphorylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Polyribonucleotide nucleotidyltransferase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=PNP_HELMI
pnp; polynucleotide phosphorylase
Displaying 22 items

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