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RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_1
R_WOR_1_46_20, WOR-1, Bacteria

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comp(3..71)
DNA (69bp) protein (23aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(252..560)
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(717..1025)
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

1171..1356
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1308..2507)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00037DD431
putative ATPase (AAA+ superfamily); K07133 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
putative ATPase (AAA+ superfamily)
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_6
R_WOR_1_46_20, WOR-1, Bacteria

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comp(2531..2761)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036CD399
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(2806..4374)
DNA (1569bp) protein (523aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

4461..5786
DNA (1326bp) protein (442aa)
polyA polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
PolyA polymerase family protein id=2557285 bin=GWC1_Spirochaetes_27_15 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
polyA polymerase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

5776..6795
DNA (1020bp) protein (340aa)
N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] id=471512 bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
cell wall hydrolase/autolysin Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
cell wall hydrolase/autolysin
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

6800..7660
DNA (861bp) protein (287aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CIS5_SYNLT
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(7669..9207)
DNA (1539bp) protein (513aa)
drm; phosphopentomutase (EC:5.4.2.7) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
phosphopentomutase (EC:5.4.2.7)
phosphopentomutase n=1 Tax=Caldibacillus debilis RepID=UPI000378D036
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

9321..9674
DNA (354bp) protein (118aa)
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
6-pyruvoyl-tetrahydropterin synthase (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PD04_DEFDS
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

9704..10489
DNA (786bp) protein (262aa)
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
dapF; putative diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] id=24610360 bin=RAAC11 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
Diaminopimelate epimerase (EC:5.1.1.7)
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

10489..11655
DNA (1167bp) protein (389aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.1); K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
LL-diaminopimelate aminotransferase (EC:2.6.1.1)
LL-diaminopimelate aminotransferase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J569_DESRM
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


11699..14116
DNA (2418bp) protein (806aa)
hydroxymethylbutenyl pyrophosphate reductase; K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_cur
Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Thermincola potens (strain JR) RepID=D5XFM1_THEPJ
hydroxymethylbutenyl pyrophosphate reductase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(14103..14390)
DNA (288bp) protein (96aa)
alias=gwe2_scaffold_243_72 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
alias=gwe2_scaffold_243_72 id=7201120 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(14406..16481)
DNA (2076bp) protein (692aa)
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2)
Ribonucleoside-triphosphate reductase class III catalytic subunit n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C355_DESTA
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(16484..16939)
DNA (456bp) protein (152aa)
Transcriptional repressor NrdR n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDQ6_9FIRM
Transcriptional repressor nrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Transcriptional repressor nrdR
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(17012..17944)
DNA (933bp) protein (311aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Methionyl-tRNA formyltransferase n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7APG0_THEM3
methionyl-tRNA formyltransferase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(17956..18483)
DNA (528bp) protein (176aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WP75_KYRT2
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

18505..19074
DNA (570bp) protein (190aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(19071..21026)
DNA (1956bp) protein (652aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Primosomal protein N' n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QR12_ACEAZ
primosomal protein N'
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_23
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(21011..22198)
DNA (1188bp) protein (396aa)
coaBC; coenzyme A biosynthesis bifunctional protein (EC:4.1.1.36); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] Tax=RIFCSPLOWO2_02_FULL
coaBC; Coenzyme A biosynthesis bifunctional proteinCoaBC; phosphopantothenoylcysteinesynthetase/decarboxylase (EC:4.1.1.36 6.3.2.5)
phosphopantothenoylcysteine decarboxylase n=1 Tax=[Clostridium] glycolicum RepID=UPI00037C1632
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_24
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(22216..22533)
DNA (318bp) protein (106aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_25
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(22530..23189)
DNA (660bp) protein (220aa)
guanylate kinase; K00942 guanylate kinase [EC:2.7.4.8] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Guanylate kinase n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MR89_9THEO
guanylate kinase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_2215_26
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

23231..24328
DNA (1098bp) protein (366aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Displaying 26 items

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