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RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_1
R_WOR_1_46_20, WOR-1, Bacteria

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2..97
DNA (96bp) protein (32aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_2
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

695..1054
DNA (360bp) protein (120aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

1179..1376
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

1383..1787
DNA (405bp) protein (135aa)
id=4489734 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
id=4489734 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(1802..2488)
DNA (687bp) protein (229aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase id=4402165 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(2504..3928)
DNA (1425bp) protein (475aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LG20_THEPS
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

3944..6319
DNA (2376bp) protein (792aa)
signal peptide peptidase SppA, 36K type (EC:3.1.3.2); K04773 protease IV [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
signal peptide peptidase SppA, 36K type (EC:3.1.3.2)
Protease IV id=1249928 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(6282..6569)
DNA (288bp) protein (96aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(6566..7405)
DNA (840bp) protein (280aa)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VVM3_THESW
Ribosomal RNA small subunit methyltransferase H Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Ribosomal RNA small subunit methyltransferase H
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_10
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(7395..7991)
DNA (597bp) protein (199aa)
Radical SAM domain protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYW6_MAHA5
Radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Radical SAM domain-containing protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(8013..9353)
DNA (1341bp) protein (447aa)
cystathionine gamma-lyase (EC:4.4.1.1); K01761 methionine-gamma-lyase [EC:4.4.1.11] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
cystathionine gamma-lyase (EC:4.4.1.1)
Cystathionine gamma-lyase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LWI3_HALO1
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(9437..10882)
DNA (1446bp) protein (482aa)
aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CR24_DESK7
aspartyl/glutamyl-tRNA amidotransferase subunit B
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(10890..11618)
DNA (729bp) protein (243aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(11626..13083)
DNA (1458bp) protein (486aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Thermincola potens (strain JR) RepID=D5XD90_THEPJ
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(13080..13367)
DNA (288bp) protein (96aa)
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W210_DESAS
glutamyl-tRNA(Gln) amidotransferase subunit C
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


comp(13390..14382)
DNA (993bp) protein (331aa)
glycoprotease family metalloendopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W4W8_CLOBI
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(14383..14790)
DNA (408bp) protein (136aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein id=4685402 bin=GWA2_Elusimicrobia_51_34 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(14787..15332)
DNA (546bp) protein (182aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
DNA polymerase subunit beta id=4685428 bin=GWA2_Elusimicrobia_51_34 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

15504..16589
DNA (1086bp) protein (362aa)
UPI0003A09523 related cluster n=1 Tax=unknown RepID=UPI0003A09523
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(16666..16986)
DNA (321bp) protein (107aa)
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Putative uncharacterized protein id=3950187 bin=GWF2_OP3_38_59 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(17046..18194)
DNA (1149bp) protein (383aa)
ndh_[C]; FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=5240775 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(18176..18508)
DNA (333bp) protein (111aa)
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Transcriptional regulator, ArsR family id=4403541 bin=GWC2_OP3-like_45_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
ArsR family transcriptional regulator
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_23
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

18583..19623
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CCA3F
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_24
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(19620..19751)
DNA (132bp) protein (44aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_3379_25
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

19825..20073
DNA (249bp) protein (83aa)
mutM; formamidopyrimidine-DNA glycosidase (EC:3.2.2.23 4.2.99.18) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein id=5801943 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
formamidopyrimidine-DNA glycosylase
Displaying 25 items

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