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RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_1
R_WOR_1_46_20, WOR-1, Bacteria

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3..560
DNA (558bp) protein (186aa)
id=2966879 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
id=2966879 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_2
R_WOR_1_46_20, WOR-1, Bacteria

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comp(572..4672)
DNA (4101bp) protein (1367aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
id=3524647 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_3
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(4672..5913)
DNA (1242bp) protein (414aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=1831167 bin=GWD2_RBX1-related_39_127 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_4
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(5918..6901)
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AVV2_SYNWW
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_5
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(6910..7152)
DNA (243bp) protein (81aa)
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Acyl carrier protein id=4361760 bin=GWF2_OP9_related_35_9 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
acpP; acyl carrier protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_6
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(7170..7919)
DNA (750bp) protein (250aa)
3-oxoacyl-(acyl-carrier-protein) reductase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=3030327 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
3-oxoacyl-(acyl-carrier-protein) reductase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_7
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(7900..8775)
DNA (876bp) protein (292aa)
ACP S-malonyltransferase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Desmospora sp. 8437 RepID=F5SCR6_9BACL
malonyl CoA-ACP transacylase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(8777..9994)
DNA (1218bp) protein (406aa)
etfA; Electron transfer flavoprotein, alpha subunit Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Putative electron transfer flavoprotein alpha-subunit (EtfA and 4Fe-4S ferredoxin modules) id=4237379 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
etfA; Electron transfer flavoprotein, alpha subunit
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(9994..10776)
DNA (783bp) protein (261aa)
electron transfer flavoprotein subunit beta n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B48F47
electron transfer flavoprotein alpha/beta-subunit; K03521 electron transfer flavoprotein beta subunit Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Electron transfer flavoprotein alpha/beta-subunit
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_10
R_WOR_1_46_20, WOR-1, Bacteria

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10863..13211
DNA (2349bp) protein (783aa)
RNA polymerase sigma factor SigA n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GBE7_9FIRM
RNA polymerase, sigma 70 subunit, RpoD Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RNA polymerase, sigma 70 subunit, RpoD
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(13240..14382)
DNA (1143bp) protein (381aa)
AAA+ superfamily protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
AAA+ superfamily protein id=3160448 bin=GWC2_Bacteroidetes_40_22 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
AAA+ superfamily protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(14476..15636)
DNA (1161bp) protein (387aa)
acyl-CoA dehydrogenase, short-chain specific (EC:1.3.99.2) Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Acyl-CoA dehydrogenase, short-chain specific id=1922839 bin=GWE2_RBX1_39_32 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
acyl-CoA dehydrogenase, short-chain specific
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_13
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(15640..16608)
DNA (969bp) protein (323aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWW3_HALOH
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_14
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(16613..17581)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00037F09BD
fatty acid/phospholipid synthesis protein PlsX Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
fatty acid/phospholipid synthesis protein PlsX
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_15
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


comp(17586..17792)
DNA (207bp) protein (69aa)
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
50S ribosomal protein L32 id=3647820 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
50S ribosomal protein L32
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_16
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(17927..18802)
DNA (876bp) protein (292aa)
tyrosine recombinase XerC n=1 Tax=Brevibacillus laterosporus RepID=UPI000375DF89
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
xerC_2; tyrosine recombinase XerC
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(18792..19217)
DNA (426bp) protein (142aa)
id=2012755 Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
id=2012755 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

19342..20532
DNA (1191bp) protein (397aa)
metK; s-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
S-adenosylmethionine synthetase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E3013B
metK; s-adenosylmethionine synthetase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_19
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(20540..23215)
DNA (2676bp) protein (892aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003719B38
5'-nucleotidase Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
5'-nucleotidase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_20
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(23212..25488)
DNA (2277bp) protein (759aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium SCGC AAA298-D23 RepID=UPI0003A1756D
smc; chromosome partition protein smc Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
smc; chromosome partition protein smc
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_21
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

25534..27246
DNA (1713bp) protein (571aa)
S-layer domain-containing protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STS4_SYNGF
S-layer protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
S-layer protein
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

27243..28133
DNA (891bp) protein (297aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_23
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

28133..30337
DNA (2205bp) protein (735aa)
sensor histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Sensor histidine kinase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AB08_CARHZ
sensor histidine kinase
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_24
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(30327..30521)
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
RIFCSPLOWO2_02_FULL_CP_46_20_rifcsplowo2_02_scaffold_1149_25
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

30603..33047
DNA (2445bp) protein (815aa)
ATPase AAA-2 domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMF9_DESK7
ATPase AAA; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
ATPase AAA
Displaying 25 items

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