ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_15550

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_15550_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2..715
DNA (714bp) protein (238aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_15550_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

721..1749
DNA (1029bp) protein (343aa)
putative UbiA family prenyltransferase (EC:2.5.1.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative UbiA family prenyltransferase (EC:2.5.1.-)
Integral membrane protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L0S9_9GAMM
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_15550_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1746..2705)
DNA (960bp) protein (320aa)
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
polysaccharide deacetylase id=12557447 bin=CNBR_ACIDO species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polysaccharide deacetylase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_15550_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2857..4422)
DNA (1566bp) protein (522aa)
AMP-dependent synthetase and ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XR64_9BACT
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
AMP-dependent synthetase and ligase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_15550_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4439..5818)
DNA (1380bp) protein (460aa)
epsB; sugar transferase EpsB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sugar transferase id=12557446 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
epsB; sugar transferase EpsB
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_15550_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5811..6596)
DNA (786bp) protein (262aa)
capsular exopolysaccharide family protein (EC:2.7.10.2) id=12557445 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
capsular exopolysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
capsular exopolysaccharide biosynthesis protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_15550_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6731..8293)
DNA (1563bp) protein (521aa)
exopolysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
gumC1; lipopolysaccharide biosynthesis protein id=12557443 bin=CNBR_ACIDO species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
exopolysaccharide biosynthesis protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_15550_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8296..9585)
DNA (1290bp) protein (430aa)
Fungal specific transcription factor domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 8 items

View Taxonomy