ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3..1859
DNA (1857bp) protein (619aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSI9_9BACT
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
multi-sensor signal transduction histidine kinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1826..2506
DNA (681bp) protein (227aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ0_9BACT
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
two component LuxR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2694..3716
DNA (1023bp) protein (341aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12556089 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3758..4168
DNA (411bp) protein (137aa)
multi-sensor hybrid histidine kinase; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Multi-sensor hybrid histidine kinase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBA0_9RHOB
histidine kinase/response regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4165..4377
DNA (213bp) protein (71aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4393..5820
DNA (1428bp) protein (476aa)
Predicted sensory transduction histidine kinase n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PX26_METTM
sensory transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sensory transduction histidine kinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5811..6191
DNA (381bp) protein (127aa)
two-component response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Transcriptional regulatory protein id=4558721 bin=GWA2_Methylomirabilis_73_35 species=ACD65 genus=ACD65 taxon_order=ACD65 taxon_class=ACD65 phylum=PER tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
two-component response regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6258..6746
DNA (489bp) protein (163aa)
CheW protein n=1 Tax=Geobacter metallireducens RCH3 RepID=H1L2X7_GEOME
CheW protein; K03408 purine-binding chemotaxis protein CheW Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cheW40H-4; scaffold protein CheW associated with MCPs of class 40H
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6743..8107
DNA (1365bp) protein (455aa)
CheR-type MCP methyltransferase (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
CheR-type MCP methyltransferase (EC:2.1.1.80)
MCP methyltransferase, CheR-type n=1 Tax=Geobacter sp. (strain M18) RepID=E8WLJ0_GEOS8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8104..8625
DNA (522bp) protein (174aa)
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
CheW protein id=3809934 bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
chemotaxis protein CheW
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8625..10268
DNA (1644bp) protein (548aa)
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Methyl-accepting chemotaxis sensory transducer id=2161113 bin=GWE2_Gallionellales_58_10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
mcp40H-21; methyl-accepting chemotaxis sensory transducer, class 40H
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_28747_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10272..11114
DNA (843bp) protein (281aa)
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
CheA signal transduction histidine kinase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A028_STAND
CheA signal transduction histidine kinase
Displaying 12 items

View Taxonomy