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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..1158)
DNA (1158bp) protein (386aa)
recombination protein MgsA; K07478 putative ATPase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
recombination factor protein RarA; K07478 putative ATPase id=12555925 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
recombination protein MgsA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1212..1592
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W8G2_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1674..1988)
DNA (315bp) protein (105aa)
Marine sediment metagenome DNA, contig: S06H3_L04836 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2134..2934)
DNA (801bp) protein (267aa)
rRNA methylase; K03437 RNA methyltransferase, TrmH family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family id=12555926 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rRNA methylase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3080..3553
DNA (474bp) protein (158aa)
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA id=12555927 bin=CNBR_ACIDO species=Nitrospina sp. AB-629-B18 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GreA/GreB family elongation factor
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3550..4998
DNA (1449bp) protein (483aa)
patatin; K07001 NTE family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12555928 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
patatin
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4983..6164
DNA (1182bp) protein (394aa)
cystathionine gamma-synthase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cystathionine gamma-synthase id=12555929 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cystathionine gamma-synthase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6239..7663)
DNA (1425bp) protein (475aa)
phosphoesterase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein id=12555932 bin=CNBR_ACIDO species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoesterase domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7771..8712
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000378CDA0
von Willebrand factor type A domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
von Willebrand factor type A domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8770..10812
DNA (2043bp) protein (681aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B id=12555933 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
excinuclease ABC subunit B
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10821..11594
DNA (774bp) protein (258aa)
transporter, putative ER-chloroplast lipid translocase (ECLT) family; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
transporter, putative ER-chloroplast lipid translocase (ECLT) family; K02066 putative ABC transport system permease protein id=12555934 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein of unknown function DUF140
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11711..12562
DNA (852bp) protein (284aa)
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC transporter, ATPase subunit id=12555935 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter ATP-binding protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12624..13664
DNA (1041bp) protein (347aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Mce family protein id=12555936 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13719..13994
DNA (276bp) protein (92aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555937 bin=CNBR_ACIDO species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13991..14413
DNA (423bp) protein (141aa)
id=12555938 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12555938 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14483..14983
DNA (501bp) protein (167aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15153..15371
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15391..15996
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DFV1_MYXXD
hypothetical protein; K07737 putative transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15993..17957
DNA (1965bp) protein (655aa)
Peptidase M56 BlaR1 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKK8_9BACT
peptidase M56, BlaR1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidase M56, BlaR1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

18032..18988
DNA (957bp) protein (319aa)
Peptidase M56, BlaR1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V15_SOLUE
peptidase M56, BlaR1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidase M56, BlaR1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19045..19998
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RA7_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20036..23173
DNA (3138bp) protein (1046aa)
TonB-dependent receptor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024G8_SOLUE
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
TonB-dependent receptor
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23245..25374
DNA (2130bp) protein (710aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024G7_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(25419..25670)
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25932..26084
DNA (153bp) protein (51aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_2362_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

26349..26555
DNA (207bp) protein (69aa)
cold-shock protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB50
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cold-shock DNA-binding protein family
Displaying 26 items

View Taxonomy