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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

224..661
DNA (438bp) protein (146aa)
Ferric uptake regulator, Fur family n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQK5_KYRT2
Fur family ferric uptake regulator; K09825 Fur family transcriptional regulator, peroxide stress response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Fur family ferric uptake regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1005..1250
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1570..1905
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225DF68
transcriptional regulator, TraR/DksA family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
dskA; DnaK suppressor protein homolog
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1905..2336
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B8F2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2489..3625
DNA (1137bp) protein (379aa)
Uncharacterized conserved protein n=1 Tax=uncultured Oceanospirillales bacterium HF4000_23O15 RepID=E0XW08_9GAMM
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NHL repeat-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3585..7904)
DNA (4320bp) protein (1440aa)
ATP dependent helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative ATP-dependent DNA helicase Lhr (EC:3.6.1.-)
ATP dependent helicase, Lhr family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U88_SOLUE
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8070..8831
DNA (762bp) protein (254aa)
Rhomboid family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAN7_ANADF
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rhomboid family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8831..9391
DNA (561bp) protein (187aa)
Rhomboid family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAN7_ANADF
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rhomboid family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9460..10095
DNA (636bp) protein (212aa)
regulatory protein TetR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
TetR family transcriptional regulator id=12555441 bin=CNBR_ACIDO species=Desulfobacter curvatus genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
regulatory protein TetR
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10184..11185
DNA (1002bp) protein (334aa)
secretion protein HlyD family protein; K01993 HlyD family secretion protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
secretion protein HlyD family protein; K01993 HlyD family secretion protein id=12555440 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secretion protein HlyD family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11182..11934
DNA (753bp) protein (251aa)
sulfate-transporting ATPase (EC:3.6.3.25) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sulfate-transporting ATPase (EC:3.6.3.25)
Sulfate-transporting ATPase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGF2_RHOMR
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11931..12365
DNA (435bp) protein (145aa)
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC-type transport system ATPase component id=3650557 bin=GWA2_Ignavibacteriae_54_16_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
ABC transporter
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12362..13684
DNA (1323bp) protein (441aa)
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
outer membrane efflux protein id=12555437 bin=CNBR_ACIDO species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane efflux protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13765..14700
DNA (936bp) protein (312aa)
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC transporter-like protein; K01990 ABC-2 type transport system ATP-binding protein id=12555436 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ybhF-C1; ABC transporter ATP-binding protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14697..15824
DNA (1128bp) protein (376aa)
ABC transporter; K09686 antibiotic transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC transporter; K09686 antibiotic transport system permease protein id=12555435 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15850..16944
DNA (1095bp) protein (365aa)
ABC transporter; K09686 antibiotic transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
export ABC transporter permease id=12555434 bin=CNBR_ACIDO species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16950..18524)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI000379A244
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
beta-lactamase domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18557..20182)
DNA (1626bp) protein (542aa)
tannase and feruloyl esterase; K09252 feruloyl esterase [EC:3.1.1.73] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035CCE04
tannase and feruloyl esterase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20240..21514
DNA (1275bp) protein (425aa)
putative oxidoreductase; K07007 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K07007 id=12556406 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative oxidoreductase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21525..21743)
DNA (219bp) protein (73aa)
id=12554824 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12554824 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

22476..23711
DNA (1236bp) protein (412aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIZ9_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
alternate gene name: yzbB
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(23730..24593)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II93_KORVE
hypothetical protein; K06966 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

24642..25121
DNA (480bp) protein (160aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(25191..26606)
DNA (1416bp) protein (472aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Pyruvate kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIL5_ANADF
pyruvate kinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

26759..27406
DNA (648bp) protein (216aa)
O-methyltransferase family protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRI1_9BACT
O-methyltransferase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
O-methyltransferase family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(27421..27627)
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_27
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

27966..28742
DNA (777bp) protein (259aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=12557552 bin=CNBR_ACIDO species=Deinococcus deserti genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
amidase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_28
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(28765..29781)
DNA (1017bp) protein (339aa)
peptidase M20; K01438 acetylornithine deacetylase [EC:3.5.1.16] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidase dimerization domain-containing protein; K01438 acetylornithine deacetylase [EC:3.5.1.16] id=12554321 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_29
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(29769..30614)
DNA (846bp) protein (282aa)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curat
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5200B
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11874_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(30623..31522)
DNA (900bp) protein (300aa)
dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] id=12554320 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dihydrodipicolinate synthase (EC:4.2.1.52)
Displaying items 1-30 of 50 in total

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