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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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1..333
DNA (333bp) protein (111aa)
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-)
glutamyl-tRNA(Gln) amidotransferase n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000361E3E8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

326..1342
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAI9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1339..2370
DNA (1032bp) protein (344aa)
ddlA; d-alanine-d-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ddlA; d-alanine-d-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAJ0_9BACT
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(2380..2652)
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(2649..2933)
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3067..3519)
DNA (453bp) protein (151aa)
heat shock protein, Hsp20 family; K13993 HSP20 family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Heat shock protein Hsp20 id=3516947 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
heat shock protein, Hsp20 family
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3567..5480)
DNA (1914bp) protein (638aa)
Chaperone protein DnaK n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML02_9BACT
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
dnaK; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5731..6555
DNA (825bp) protein (275aa)
metallophosphoesterase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Ser/Thr protein phosphatase; K09769 hypothetical protein id=12557828 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
metallophosphoesterase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6660..8012
DNA (1353bp) protein (451aa)
xseA; exodeoxyribonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] id=12557829 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
xseA; exodeoxyribonuclease VII large subunit
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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8009..8242
DNA (234bp) protein (78aa)
exodeoxyribonuclease 7 small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
xseB; exonuclease VII small subunit (EC:3.1.11.6) id=12557830 bin=CNBR_ACIDO species=Marinobacter sp. EVN1 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
exodeoxyribonuclease 7 small subunit
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8256..9215
DNA (960bp) protein (320aa)
poluprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
geranylgeranyl pyrophosphate synthase (EC:2.5.1.10) id=12557831 bin=CNBR_ACIDO species=Rhodanobacter denitrificans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
poluprenyl synthetase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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9453..10157
DNA (705bp) protein (235aa)
hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] id=12557832 bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hemolysin A
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10329..11195
DNA (867bp) protein (289aa)
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase id=2598283 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11354..12379)
DNA (1026bp) protein (342aa)
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
aminodeoxychorismate lyase; K07082 UPF0755 protein id=12557834 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aminodeoxychorismate lyase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12386..12814)
DNA (429bp) protein (143aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] id=12557835 bin=CNBR_ACIDO species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Holliday junction resolvase YqgF
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12847..14169
DNA (1323bp) protein (441aa)
M23/M37 peptidase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=8266938 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
zinc metalloendopeptidase M23 domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_5532_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14183..14335
DNA (153bp) protein (51aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 17 items

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