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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(85..960)
DNA (876bp) protein (292aa)
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] id=12555237 bin=CNBR_ACIDO species=Desulfovibrio oxyclinae genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate transporter ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphate transporter ATP-binding protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1024..1797)
DNA (774bp) protein (258aa)
Thymidylate kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ24_CHLTF
thymidylate kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thymidylate kinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1781..2269)
DNA (489bp) protein (163aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ25_CHLTF
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2217..4013)
DNA (1797bp) protein (599aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative exopolyphosphatase (EC:3.6.1.11); K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] id=12555370 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Ppx/GppA phosphatase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4073..4999
DNA (927bp) protein (309aa)
Metallophosphoesterase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T892_9EURY
metallophosphoesterase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
metallophosphoesterase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5009..5509
DNA (501bp) protein (167aa)
phosphohistidine phosphatase, SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-] id=12555369 bin=CNBR_ACIDO species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphohistidine phosphatase SixA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5512..5949)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036DBD29
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6020..6760)
DNA (741bp) protein (247aa)
response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain-containing protein; K07658 two-component system, OmpR family, alkaline phosphatase synthesis respons
response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain-containing protein; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=12555367 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7009..7410
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7772..10207)
DNA (2436bp) protein (812aa)
twin-arginine translocation pathway signal protein n=1 Tax=Chlorogloeopsis RepID=UPI0002D8C6F7
twin-arginine translocation pathway signal protein; K07093 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
twin-arginine translocation pathway signal protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10419..10841)
DNA (423bp) protein (141aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11109..12479
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7K107_CYAP8
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12500..13753
DNA (1254bp) protein (418aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glycerophosphoryl diester phosphodiesterase n=1 Tax=Methylococcus capsulatus RepID=UPI00035F277E
glycerophosphoryl diester phosphodiesterase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13907..14638
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003699944
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
family 2 glycosyl transferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14640..15386
DNA (747bp) protein (249aa)
PHP domain; K07053 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PHP domain, putative id=4289390 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
PHP domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15533..16846
DNA (1314bp) protein (438aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Uncharacterized protein id=12556909 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16869..17897
DNA (1029bp) protein (343aa)
ABC transporter, periplasmic phosphate binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC transporter, periplasmic phosphate binding protein id=12556908 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter periplasmic phosphate binding protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17999..18955
DNA (957bp) protein (319aa)
phosphate ABC transporter inner membrane protein; K02037 phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphate ABC transporter inner membrane protein; K02037 phosphate transport system permease protein id=12556907 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate ABC transporter permease
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

18952..19785
DNA (834bp) protein (278aa)
phosphate ABC transporter permease PstA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pstA; phosphate ABC transporter permease PstA; K02038 phosphate transport system permease protein id=12556906 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate ABC transporter permease PstA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19947..20156
DNA (210bp) protein (70aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(20153..21073)
DNA (921bp) protein (307aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconateDelta-isomerase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFR3_9CHLR
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21147..21641)
DNA (495bp) protein (165aa)
Protein-tyrosine-phosphatase n=1 Tax=Spiribacter salinus M19-40 RepID=R4VKM3_9GAMM
protein-tyrosine-phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
protein-tyrosine-phosphatase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21651..22313)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000373CBB6
MIP family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
MIP family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22323..23168)
DNA (846bp) protein (282aa)
arsM; arsenite S-adenosylmethyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Methyltransferase type 11 id=4759444 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
arsM; arsenite S-adenosylmethyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23218..23604
DNA (387bp) protein (129aa)
Putative transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHP5_SINAD
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
transcriptional regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(23624..24904)
DNA (1281bp) protein (427aa)
glgC; glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glgC; glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] id=12555368 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glgC; glucose-1-phosphate adenylyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3662_27
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(24947..25744)
DNA (798bp) protein (266aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidoba
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] id=12555364 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histidine kinase
Displaying 27 items

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