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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2..250
DNA (249bp) protein (83aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative uncharacterized protein id=2960759 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

254..589
DNA (336bp) protein (112aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative uncharacterized protein id=2960758 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1612..1956
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B522DA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2342..2650
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Microcystis aeruginosa RepID=I4G0S7_MICAE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3005..3319
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MJU9_BDEBA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3504..4469)
DNA (966bp) protein (322aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4538..4939)
DNA (402bp) protein (134aa)
Two-component response transcriptional regulatory protein PrrA n=5 Tax=Mycobacterium RepID=B2HF74_MYCMM
prrA; two component response transcriptional regulatory protein PrrA; K07671 two-component system, OmpR family, response regulator PrrA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
prrA; two component response transcriptional regulatory protein PrrA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5074..5640
DNA (567bp) protein (189aa)
phaF; poly(3-hydroxyalkanoate) granule-associated protein PhaF Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phaF; poly(3-hydroxyalkanoate) granule-associated protein PhaF id=12556919 bin=CNBR_ACIDO species=Pseudomonas mandelii genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5677..6270
DNA (594bp) protein (198aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6311..7618
DNA (1308bp) protein (436aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12556920 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7636..8583)
DNA (948bp) protein (316aa)
type II R/M system modification methyltransferase; K00571 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]; K00590 site-specific DNA-methyltransferase (cytosine-N4-specific) [EC:2.1.1.113] id=12556921 bin=CNBR_ACIDO species=Methanocaldococcus jannaschii genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA methylase N-4/N-6 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA methylase N-4/N-6 domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8721..8930)
DNA (210bp) protein (70aa)
id=12556922 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12556922 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9568..10674
DNA (1107bp) protein (369aa)
pbpG; D-alanyl-D-alanine carboxypeptidase (EC:3.4.-.-); K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pbpG; PbpG; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] id=12556923 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pbpG; D-alanyl-D-alanine carboxypeptidase (EC:3.4.-.-)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10713..11651)
DNA (939bp) protein (313aa)
Formate dehydrogenase accessory protein FdhE n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G6X0_9DELT
formate dehydrogenase accessory protein; K02380 FdhE protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
formate dehydrogenase accessory protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11722..13254
DNA (1533bp) protein (511aa)
glycogen/starch synthase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glycogen synthase id=12556924 bin=CNBR_ACIDO species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycogen/starch synthase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13285..13614
DNA (330bp) protein (110aa)
thioredoxin; K03671 thioredoxin 1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thioredoxin; K03671 thioredoxin 1 id=12556925 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thioredoxin
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13616..14536
DNA (921bp) protein (307aa)
trxB; thioredoxin reductase, FAD/NAD(P)-binding (EC:1.8.1.9) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=12556926 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
trxB; thioredoxin reductase, FAD/NAD(P)-binding (EC:1.8.1.9)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14640..17399)
DNA (2760bp) protein (920aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003787C23
serine/threonine protein kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
serine/threonine protein kinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17753..18010
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

18010..18126
DNA (117bp) protein (39aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18139..19209)
DNA (1071bp) protein (357aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] id=12556927 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19352..20521)
DNA (1170bp) protein (390aa)
aminotransferase, class V; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] id=12556928 bin=CNBR_ACIDO species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aminotransferase, class V
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20792..21220
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12556929 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

21242..21859
DNA (618bp) protein (206aa)
id=12556930 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12556930 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

22035..22826
DNA (792bp) protein (264aa)
hypothetical protein; K09134 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K09134 hypothetical protein id=12556931 bin=CNBR_ACIDO species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

22844..23842
DNA (999bp) protein (333aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] id=14627513 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_27
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23931..24566
DNA (636bp) protein (212aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJ75_ANASK
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Sua5/YciO/YrdC/YwlC family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_28
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

24548..25813
DNA (1266bp) protein (422aa)
HflX; GTPase; K03665 GTP-binding protein HflX Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
HSR1-like GTP-binding protein; K03665 GTP-binding protein HflX id=12556932 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HflX; GTPase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_29
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25872..26444
DNA (573bp) protein (191aa)
phosphatidylglycerophosphate synthase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pgsA_2; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] id=12556934 bin=CNBR_ACIDO species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphatidylglycerophosphate synthase (EC:2.7.8.5)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3926_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

26441..27640
DNA (1200bp) protein (400aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cyclophilin type peptidyl-prolyl cis-trans isomerase id=12554692 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cyclophilin type peptidyl-prolyl cis-trans isomerase
Displaying items 1-30 of 53 in total

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