ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194

Search features with annotation key words

Displaying items 31-55 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_31
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(28412..28996)
DNA (585bp) protein (195aa)
translation elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
translation elongation factor P; K02356 elongation factor P id=12557288 bin=CNBR_ACIDO species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
translation elongation factor P
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_32
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(29198..30757)
DNA (1560bp) protein (520aa)
Alcohol dehydrogenase (Fragment) n=1 Tax=Sphingomonas sp. NP5 RepID=C9K6B7_9SPHN
oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative zinc-type alcohol dehydrogenase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_33
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(30754..31719)
DNA (966bp) protein (322aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_34
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(31771..32439)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EH55_BRASB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_35
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(32436..33017)
DNA (582bp) protein (194aa)
RNA polymerase sigma factor n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037B5B26
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RNA polymerase sigma factor, sigma-70 family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_36
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

33199..33585
DNA (387bp) protein (129aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_37
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(33688..34338)
DNA (651bp) protein (217aa)
transcriptional repressor for high-affinity phosphate uptake Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
transcriptional repressor for high-affinity phosphate uptake id=14624875 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin5_DeltaP organism_group=Deltaproteobacteria
transcriptional repressor for high-affinity phosphate uptake
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_38
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(34386..35177)
DNA (792bp) protein (264aa)
ABC transporter-like protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037B7C66
ABC transporter-like protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_39
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(35174..35944)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000382540C
ABC transporter-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC transporter-like protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_40
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(35938..36885)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036453DE
phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphate ABC transporter permease
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_41
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(36878..37786)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037102B5
phosphate ABC transporter permease; K02037 phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphate ABC transporter permease
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_42
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(37808..38722)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036D7753
phosphate binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphate binding protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_43
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(38865..39302)
DNA (438bp) protein (146aa)
NIPSNAP family containing protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R272_PIRSD
NIPSNAP family containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NIPSNAP family containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_44
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(39328..40050)
DNA (723bp) protein (241aa)
Aldo/keto reductase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CU32_SIDLE
aldo/keto reductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
aldo/keto reductase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_45
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(40137..41387)
DNA (1251bp) protein (417aa)
Alcohol dehydrogenase (Fragment) n=1 Tax=Sphingomonas sp. NP5 RepID=C9K6B7_9SPHN
oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
oxidoreductase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_46
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

41598..42602
DNA (1005bp) protein (335aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Beta-lactamase domain protein id=4923587 bin=GWC2_Syntrophus__56_31 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_47
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

42628..42942
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NPQ4_GRAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_48
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

42955..43326
DNA (372bp) protein (124aa)
FIG01305107: hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative uncharacterized protein id=4319705 bin=GWA2_Methylomirabilis_73_35 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FIG01305107: hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_49
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(43239..44612)
DNA (1374bp) protein (458aa)
amidohydrolase n=1 Tax=Sphingomonas elodea RepID=UPI0002631637
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
amidohydrolase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_50
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(44647..47115)
DNA (2469bp) protein (823aa)
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Uncharacterized protein id=4764258 bin=GWC2_Nitrospirae-rel_56_14 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_51
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

47226..50474
DNA (3249bp) protein (1083aa)
DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RXZ0_SYNP3
DNA/RNA helicase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA/RNA helicase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_52
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

50478..54389
DNA (3912bp) protein (1304aa)
Uncharacterized protein n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QJA2_9NOSO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_53
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

54405..55829
DNA (1425bp) protein (475aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4ILH0_9DELT
RNA-directed DNA polymerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RNA-directed DNA polymerase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_54
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(55668..56594)
DNA (927bp) protein (309aa)
Transposition helper protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AAL0_9ZZZZ
transposase-associated IstB-like ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
transposase-associated IstB-like ATP-binding protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_55
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(56591..57031)
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying items 31-55 of 55 in total

View Taxonomy