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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4194_35

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(32436..33017)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037B5B26 similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 169.0
  • Bit_score: 169
  • Evalue 3.10e-39
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 193.0
  • Bit_score: 371
  • Evalue 7.40e-100
RNA polymerase sigma factor, sigma-70 family protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 179.0
  • Bit_score: 178
  • Evalue 1.90e-42

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGTTCGGCACGGCCTCGACATGATAGATCACGGTGCGAGTAACGACCGGCTCGCGGCGCTGATGCGGGCGGCACAGGCGGGTGACGCCGGCGCGTACGTGCAGTTGCTGCAGGACGTTACGGCACGCCTGCGTCGGATAGTCGGCCGACAGCGACAATTCCTGGCCGCCGAAGATGTAGAGGACCTGGTTCAGGACATCCTGCTCTCGCTCCATGCGGCCCGCGCCACCTACAATCCGCGGCGTCCGTTCATGCCGTGGCTGCTGGCTATTGTCAAGAACCGTCTGGCCGATGGCGCACGCCGCTATGCCCGCGGCCCGGCGCGCGAGGTTCACGTCGAGGACCTCGACGTAACCTTTCTCGCCGAGATGACGAATACCGTCACCGAGGTCGGAGATCCAGAGGCCCTGCGGCAGGCGATTGAGGCGCTGCCCGCCGGGCAACGCGAGGCGATCGAGATGTTGAAGCTGCGGGAAATGTCTCTCAAGGAGGCGGCAGCCGCGAGCGGGACGAGTGTGGGCGCGCTCAAAGTGGCCACGCACCGCGCGATGGCCGCGCTGCGCAACAAGCTGACGTCATGA
PROTEIN sequence
Length: 194
MVRHGLDMIDHGASNDRLAALMRAAQAGDAGAYVQLLQDVTARLRRIVGRQRQFLAAEDVEDLVQDILLSLHAARATYNPRRPFMPWLLAIVKNRLADGARRYARGPAREVHVEDLDVTFLAEMTNTVTEVGDPEALRQAIEALPAGQREAIEMLKLREMSLKEAAAASGTSVGALKVATHRAMAALRNKLTS*