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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..140)
DNA (138bp) protein (46aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

152..1105
DNA (954bp) protein (318aa)
adoK; adenosine kinase (EC:2.7.1.20); K00856 adenosine kinase [EC:2.7.1.20] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
adoK; adenosine kinase (EC:2.7.1.20); K00856 adenosine kinase [EC:2.7.1.20] id=12555132 bin=CNBR_ACIDO species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
adoK; adenosine kinase (EC:2.7.1.20)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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1143..2441
DNA (1299bp) protein (433aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJR7_RHOM4
major facilitator superfamily protein; K06902 MFS transporter, UMF1 family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
major facilitator superfamily protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2434..3207
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000375AA3D
m48 ste24p family peptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidase M48
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3221..4873)
DNA (1653bp) protein (551aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12554865 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5178..8324)
DNA (3147bp) protein (1049aa)
RND family efflux transporter n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FDQ9_SORC5
RND family efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RND family efflux transporter
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8312..9463)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XR49_SORCE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9509..10711)
DNA (1203bp) protein (401aa)
RND family efflux transporter n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FDQ5_SORC5
RND family efflux transporter Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RND family efflux transporter
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10734..11471)
DNA (738bp) protein (246aa)
Transcriptional regulator, TetR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEK3_FLUTR
TetR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
TetR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11686..12081
DNA (396bp) protein (132aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555134 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12078..12257
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12284..12739
DNA (456bp) protein (152aa)
riboflavin synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RISB_SYNFM
riboflavin synthase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12729..13166
DNA (438bp) protein (146aa)
NusB antitermination factor; K03625 N utilization substance protein B Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NusB antitermination factor; K03625 N utilization substance protein B id=12555138 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NusB antitermination factor
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13255..14754
DNA (1500bp) protein (500aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
lysS; Lysyl-tRNA synthetase (LysRS) (EC:6.1.1.6) id=12555139 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14897..16129
DNA (1233bp) protein (411aa)
lipoprotein releasing system transmembrane protein LolC/E family; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
lipoprotein releasing system transmembrane protein LolC/E family; K09808 lipoprotein-releasing system permease protein id=12555140 bin=CNBR_ACIDO species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lipoprotein releasing system transmembrane protein LolC/E family
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16221..16904
DNA (684bp) protein (228aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphonate-transporting ATPase (EC:3.6.3.28) id=12555141 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17189..19624
DNA (2436bp) protein (812aa)
clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=12555145 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19563..22496
DNA (2934bp) protein (978aa)
surface antigen Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
surface antigen (D15) id=12555146 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
surface antigen
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22542..22991)
DNA (450bp) protein (150aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23070..23837
DNA (768bp) protein (256aa)
outer membrane chaperone Skp (OmpH); K06142 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
outer membrane chaperone Skp; K06142 outer membrane protein id=16783862 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
outer membrane chaperone Skp
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23942..25195
DNA (1254bp) protein (418aa)
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] id=12555149 bin=CNBR_ACIDO species=Ceratitis capitata genus=Ceratitis taxon_order=Diptera taxon_class=Insecta phylum=Arthropoda tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25197..26024
DNA (828bp) protein (276aa)
hypothetical protein; K09949 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K09949 hypothetical protein id=12555150 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

26029..26967
DNA (939bp) protein (313aa)
dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative dehydrogenase-like protein id=12555151 bin=CNBR_ACIDO species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dehydrogenase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

27066..28514
DNA (1449bp) protein (483aa)
UbiD family decarboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B37C18
UbiD family decarboxylase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

28541..29392
DNA (852bp) protein (284aa)
radical SAM domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
radical SAM domain-containing protein id=12555152 bin=CNBR_ACIDO species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
radical SAM domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

29389..30246
DNA (858bp) protein (286aa)
hypothetical protein; K07081 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K07081 id=12555153 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_27
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

30317..31525
DNA (1209bp) protein (403aa)
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
radical SAM protein id=12555154 bin=CNBR_ACIDO species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
radical SAM protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_28
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

31609..32748
DNA (1140bp) protein (380aa)
S-adenosylhomocysteine deaminase (EC:3.5.4.28) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S-adenosylhomocysteine deaminase (EC:3.5.4.28) id=12555155 bin=CNBR_ACIDO species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
S-adenosylhomocysteine deaminase (EC:3.5.4.28)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_29
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

32742..33596
DNA (855bp) protein (285aa)
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative 4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] id=12555156 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
4-hydroxybenzoate polyprenyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14182_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

33673..34392
DNA (720bp) protein (240aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase ubiE; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] id=12555158 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ubiquinone/menaquinone biosynthesis methyltransferase
Displaying items 1-30 of 41 in total

View Taxonomy