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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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2..607
DNA (606bp) protein (202aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12554049 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(643..1560)
DNA (918bp) protein (306aa)
putative agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFC6_9BACT
putative agmatinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1544..2632)
DNA (1089bp) protein (363aa)
dys-1; deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
dys-1; deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase id=1250267 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2662..4200)
DNA (1539bp) protein (513aa)
ABC peptide transporter, periplasmic ligand binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC peptide transporter, periplasmic ligand binding protein id=1953451 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptide ABC transporter substrate-binding protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4197..6854)
DNA (2658bp) protein (886aa)
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS id=12554050 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA mismatch repair protein MutS
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


6921..7709
DNA (789bp) protein (263aa)
ribosomal-protein-alanine acetyltransferase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=12554051 bin=CNBR_ACIDO species=Collinsella aerofaciens genus=Collinsella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M22 glycoprotease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7682..8146
DNA (465bp) protein (155aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ribosomal-protein-alanine acetyltransferase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=12554051 bin=CNBR_ACIDO species=Collinsella aerofaciens genus=Collinsella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribosomal-protein-alanine acetyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8294..8518
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP38_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8525..9163
DNA (639bp) protein (213aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] id=12554052 bin=CNBR_ACIDO species=Janibacter sp. HTCC2649 genus=Janibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9156..10022
DNA (867bp) protein (289aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
CDP-diacylglycerol/serine O-phosphatidyltransferase (EC:2.7.8.8)
pssA; phosphatidylserine synthase id=12554053 bin=CNBR_ACIDO species=Azotobacter vinelandii genus=Azotobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_25702_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10000..10941)
DNA (942bp) protein (314aa)
PAS/PAC sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_1
Putative uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=C6G4E0_9BACT
PAS/PAC sensor signal transduction histidine kinase
Displaying 11 items

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