ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_4

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3878..5614)

Top 3 Functional Annotations

Value Algorithm Source
protein translocase subunit yidC; K03217 preprotein translocase subunit YidC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 578.0
  • Bit_score: 1145
  • Evalue 0.0
YidC/Oxa1 family membrane protein insertase; K03217 preprotein translocase subunit YidC id=12554746 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 580.0
  • Bit_score: 486
  • Evalue 3.40e-134
protein translocase subunit yidC similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 584.0
  • Bit_score: 330
  • Evalue 8.80e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGGAACGCCGCTTCATCATCGCCGCCCTGCTCGCGTTTCTCGTTCTGTACGGCTGGCAAGCCCTGTTCGTGAGGCCCGTGCCGCGACCGACGCCGGGAGCTGCTGTCGAGCGGGGTACCGCGAGCACGGCCACACCCGCGCCACCGCCCGGCGCGGCGAGGGCCGCGGCGGCGGAAGCGGTAGCGCCAACGAGGGCGGCCGCGATTGTTGGCGAAGCGGTCGAGCGCGACATCCGCGTGGAGACGCGGGACGTGGTCGCGGTGTTCACCAATCGCGGCGCCCGGCTCAAGAGCTGGCGGCTCAAGCACTACCTCGACGAAGACAACGAACCGCTCGAGCTCGTTGCCGGCGAGCTGGCCGACACCCAGGCGCTTCCCTTTTCGCTCAGGCTTCCGGACCGAGCGATGACAGCCACGCTCAACGACGCGCTGTATTCGGCAAGCGGTGCGGCGGCAGATCCGAACGCGGTTTCCACGCCGACACAGCTGACCTTTGAATACCGCAACGACGCGGGTCTTCGAGCCGTCAAGGAATTTCGCCTGGAGCCTTCGTCCTACCTCGTCTCTTTCCGCGCGGCGGTGACCGACGGCGACCAGACGCTCGCGCCGGCCATCGTATGGGGCCCCGGGCTGGCGGACACCAAAGCGGTGGTGAGCCGCTGGGCCGTCAAGCCCAGGGCGCTGTTGTCGTCGGGCGGGGACGTCGAGCGCATCGTGACCGCCGACATCGTCAAGCAGCCGGTGTACGAGCAGAACTTCGAGTACGTGGGCGTGGACGATACCTACTTCATGACGATTGCATTGGGCCCGGGCATGTCGAAGGTGTCGTACGAGCCGGCCGCCATTCCGCCACCAGAGGGCTCCGCCGATCCCGCCCGCGAGCTGATGTCGTACTCCATCGAGCCGGCACGGCGCGACGGCGCGGTCAAGTTTTACGTGGGGCCGAAGGAACTCGAGGCGCTGTCCGCGATCGATCGCGGCCTGGTGCGCGCGATCGATTTCGGCATGTTTTCGTTCATCGTCGTACCGCTCCTGAGAACACTCAACTGGATCAACGGGCTGGTGGGCAACTACGGCTGGTCGATCGTCATCCTGACGGCCATCCTCAACGTGATCATGCTTCCGCTCCGGCACAGACAGGTCGTGTCGATGCGGAAGATGCAGGAGCTGCAGCCACAGGTCAAGGGCATCCAGGAGCGTTACGGAAAGCTCAAGACAACCGATCCGGCCAAGCAGAAGATGAACCAAGAGCTGATGGCGCTCTATCGCGAGCGAGGCGTGAACCCGGCGGGCGGTTGCATCCCGATGCTGCTGACGCTTCCGCTGGTATTCGCCTTCTACGGACTGCTGACGGTCGCCATCGAGCTTCGCGGCGCGCCGTTCATGGGCTGGGTCCAGGATCTGTCGCAACCCGATCCCTATTACGTCACGCCGATTCTGATGGGCGCGAGCCAGCTCTGGCAGCAGCTCATCACGCCGGCGGCCGGCATGGATCCGACGCAGCAGAAAATCATGCTGATCATGCCCGTGATGATGACCGTCTTGTTCCTCGGCTATCCATCGGGCGTGGCGCTCTACTGGCTGATGGCGAACGTCTTCGGTATCGGCCAGCAGTACGTCACGAACTCGCTTATCGGGCCGCCCACGGTGCCGACCATCCGGCCGCCGGCCGAGCGTCGCATCAAACGCGTCGGGGGCGGGAAGACCGAGGCGGCCGACGCACACAACAAGGACTAG
PROTEIN sequence
Length: 579
MERRFIIAALLAFLVLYGWQALFVRPVPRPTPGAAVERGTASTATPAPPPGAARAAAAEAVAPTRAAAIVGEAVERDIRVETRDVVAVFTNRGARLKSWRLKHYLDEDNEPLELVAGELADTQALPFSLRLPDRAMTATLNDALYSASGAAADPNAVSTPTQLTFEYRNDAGLRAVKEFRLEPSSYLVSFRAAVTDGDQTLAPAIVWGPGLADTKAVVSRWAVKPRALLSSGGDVERIVTADIVKQPVYEQNFEYVGVDDTYFMTIALGPGMSKVSYEPAAIPPPEGSADPARELMSYSIEPARRDGAVKFYVGPKELEALSAIDRGLVRAIDFGMFSFIVVPLLRTLNWINGLVGNYGWSIVILTAILNVIMLPLRHRQVVSMRKMQELQPQVKGIQERYGKLKTTDPAKQKMNQELMALYRERGVNPAGGCIPMLLTLPLVFAFYGLLTVAIELRGAPFMGWVQDLSQPDPYYVTPILMGASQLWQQLITPAAGMDPTQQKIMLIMPVMMTVLFLGYPSGVALYWLMANVFGIGQQYVTNSLIGPPTVPTIRPPAERRIKRVGGGKTEAADAHNKD*