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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(660..1949)
DNA (1290bp) protein (430aa)
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme id=12554743 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1969..3333)
DNA (1365bp) protein (455aa)
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] id=12554744 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA modification GTPase TrmE
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3398..3853)
DNA (456bp) protein (152aa)
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative RNA-binding protein id=12554745 bin=CNBR_ACIDO species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA-binding protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3878..5614)
DNA (1737bp) protein (579aa)
protein translocase subunit yidC; K03217 preprotein translocase subunit YidC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
YidC/Oxa1 family membrane protein insertase; K03217 preprotein translocase subunit YidC id=12554746 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein translocase subunit yidC
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5822..6331
DNA (510bp) protein (170aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6572..7903
DNA (1332bp) protein (444aa)
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein id=12554750 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chromosomal replication initiator protein DnaA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8166..9278
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA polymerase III, beta subunit; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=12554751 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA polymerase III subunit beta (EC:2.7.7.7)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9275..11812
DNA (2538bp) protein (846aa)
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] id=12554752 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA gyrase subunit B
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


11916..14396
DNA (2481bp) protein (827aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=12554753 bin=CNBR_ACIDO species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA gyrase subunit A (EC:5.99.1.3)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14398..14886)
DNA (489bp) protein (163aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14892..17141)
DNA (2250bp) protein (750aa)
ATP-dependent DNA helicase PcrA (EC:3.6.4.12) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12) id=12554754 bin=CNBR_ACIDO species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17153..18997)
DNA (1845bp) protein (615aa)
glutamine--fructose-6-phosphate transaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16) id=12554760 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glutamine--fructose-6-phosphate transaminase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18997..20433)
DNA (1437bp) protein (479aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] id=12554761 bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(20444..21115)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035F464D
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21206..22063)
DNA (858bp) protein (286aa)
methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GND5_9CYAN
methyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

22095..23756
DNA (1662bp) protein (554aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=14632489 bin=bin9_gal15 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23769..24131
DNA (363bp) protein (121aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative regulatory protein, FmdB family id=12554763 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(24128..25027)
DNA (900bp) protein (300aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UDP-glucose pyrophosphorylase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] id=12554764 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25070..26380
DNA (1311bp) protein (437aa)
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=12554765 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
seryl-tRNA synthetase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

26436..28334
DNA (1899bp) protein (633aa)
oligoendopeptidase F; K08602 oligoendopeptidase F [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
oligoendopeptidase F; K08602 oligoendopeptidase F [EC:3.4.24.-] id=12555859 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

28334..29563
DNA (1230bp) protein (410aa)
acyl-CoA synthetase (EC:2.3.1.86); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
acyl-CoA synthetase (EC:2.3.1.86)
Probable long-chain fatty-acid-CoA ligase n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANZ3_DESPS
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

29670..30905
DNA (1236bp) protein (412aa)
Rhodopirellula transposase family protein n=1 Tax=mine drainage metagenome RepID=T1CVV9_9ZZZZ
rhodopirellula transposase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rhodopirellula transposase family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(30958..31953)
DNA (996bp) protein (332aa)
sodium/calcium exchanger membrane region; K07301 inner membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sodium/calcium exchanger membrane region; K07301 inner membrane protein id=24535417 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
sodium/calcium exchanger membrane region
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

32031..32954
DNA (924bp) protein (308aa)
Universal stress protein UspA-like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D6H2_SINAD
universal stress protein UspA-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
universal stress protein UspA-like protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(33034..34599)
DNA (1566bp) protein (522aa)
Glycoside hydrolase 15-related protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CN53_SIDLE
glycoside hydrolase 15-related protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glycoside hydrolase 15-related protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_trna_1
unknown

Not on your lists

34883..34969
DNA (87bp)
transferRNA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(34990..37323)
DNA (2334bp) protein (778aa)
ATP-dependent Clp protease ATP-binding protein ClpA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ATP-dependent Clp protease ATP-binding protein ClpA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA id=12554431 bin=CNBR_ACIDO species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent Clp protease ATP-binding protein ClpA
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_27
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(37339..37662)
DNA (324bp) protein (108aa)
clpS; ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS id=12554432 bin=CNBR_ACIDO species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
clpS; ATP-dependent Clp protease adaptor protein ClpS
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_28
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

37680..38348
DNA (669bp) protein (223aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A5X1_9ACTN
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_29
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

38387..39436
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035DEEDF
putative cytochrome c-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative cytochrome c-binding protein
Displaying items 1-30 of 41 in total

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