ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_3364_36

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(45348..46469)

Top 3 Functional Annotations

Value Algorithm Source
phage integrase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 373.0
  • Bit_score: 747
  • Evalue 7.40e-213
phage integrase family protein id=12555112 bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 354.0
  • Bit_score: 421
  • Evalue 1.10e-114
phage integrase family protein similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 372.0
  • Bit_score: 388
  • Evalue 3.00e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGAGCGTGAAATTACGACCGTATCGAAACGGAGGGTGGGAGGTGGACATTCAGTTCCGCCTCCCCGACGGGACGCGTCACCGGGAACGGTACAAGGCGCCCGTTGAATCAAAATCCGGCGCGTTGCGCTGGGGCCAGGACCGCGAGCGGCATCTGCTGCAACACGGTCCCGAGCCTGCAAAGAAGGAGGTGCCAACACTCGAGGAGTTCGCGCCGAAGTTCCTGGAGGGTTACGCCAAAGCGGACAGGCACAAGCCGAGTGGCGTCGCGTCGAAGGAAACAATCCTCCGGATCCACCTGATCCCGGTGCTTGGGGAGCAGCAGCTCGACGCGATCTCAAACGCACAGGTGCAGCGATTGAAGCTGCACTTGAAGGACAGAGCGGCCAAGACCGTGAACAACGTGCTGACTGTGTTGAATGTCATGCTGAAGACCGCAGTGGAGTGGGAGATGATCGACCAACTTCCGTGTTCGATCCGCTTGCTGCCCGTTGCGCGTCGTGATGCGGCGTTCCACGATTTCGAGGCGTACGAACGTCTACTCGAAGGGGCGCGTTCGATCGATTGGCGGACCTACGTGATCGCCTTGCTGGGCGGTGAAGGCGGGATGCGAGCCGGCGAAATCGTCGCGTTGGAATGGGCCGACATCGACCTCGAACGGCGACAGATCAGCATTCGCCACTCGGATTGGCGCGGCCAGCTGACGAGCCCGAAGAGCGGCAGAGGTCGGTTCGTAGCGATGACCGAGCGGGTAGCGACGGCTCTTCGCAAGCAGCGTCACCTTCGCAGCCCACGCGTGCTGTGCCTGGACGATGGGAAGCCGATCACTCGGCAAGGCGCCTGGTCGCGCGTTCGCTACGCGGCGCACCGGGCGAATGTGCCGACCGGCGTTCACATCCTGCGTCACACGTTCTGCTCGCACCTGGTGATGCGAGGGGCGGCGATGCGGTCGGTGCAGGAACTGGTGGGCCACCAGGATCTGACGATGACCCAGCGGTATTCGCACCTGAGTCCGGCCGCGTTGATCGACACGGTTCGGTTGTTGGAATCGAGAGTGGCTGAATCCGGACGTGGAGAAATACTGGAGACGGCTGAAGGCCGCGATAGGAAGTTGAAGTCCTAG
PROTEIN sequence
Length: 374
MSVKLRPYRNGGWEVDIQFRLPDGTRHRERYKAPVESKSGALRWGQDRERHLLQHGPEPAKKEVPTLEEFAPKFLEGYAKADRHKPSGVASKETILRIHLIPVLGEQQLDAISNAQVQRLKLHLKDRAAKTVNNVLTVLNVMLKTAVEWEMIDQLPCSIRLLPVARRDAAFHDFEAYERLLEGARSIDWRTYVIALLGGEGGMRAGEIVALEWADIDLERRQISIRHSDWRGQLTSPKSGRGRFVAMTERVATALRKQRHLRSPRVLCLDDGKPITRQGAWSRVRYAAHRANVPTGVHILRHTFCSHLVMRGAAMRSVQELVGHQDLTMTQRYSHLSPAALIDTVRLLESRVAESGRGEILETAEGRDRKLKS*