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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_12318_6

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 10054..10779

Top 3 Functional Annotations

Value Algorithm Source
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 472
  • Evalue 3.90e-130
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=12554062 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 242.0
  • Bit_score: 372
  • Evalue 3.00e-100
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 238.0
  • Bit_score: 314
  • Evalue 2.70e-83

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGGCAACGCTGCGGACGCGGGATCTCACCAAGTCGTACGGCGGCCGCACGGTCGTACGCAGTGTCAATCTCGAGGTTGCCTCGGGTGAGATTGTCGGCCTGCTCGGGCCAAACGGCGCCGGCAAGACGACGACGTTCTACATGACCGTGGGCCTGACGGCACCGGATTCGGGCCGTGTCGAGATCGACGGCCAGGACGTGACCGACGACCCGATGTACATCCGGGCCCGAAAGGGCATCGGGTACTTGCCACAGGAGCCCTCGATCTTCCGCGGCCTGACCGTCGAGCAGAACCTCTTGGCCATTCTCGAAACGACGGACCTCAGCCCGGCGGCGCGCCGGGCACGGCTTGGCGAGCTGCTGGCGGAGCTGAACCTGACGCCGCTCGCACACGCGCCCGCCCATACCTTGTCGGGTGGCGAGCGTCGGCGGGTCGAAATCACGCGCGCGCTCGTGGTGTCGCCCAAGTTCATCCTCCTCGACGAGCCGTTCGCGGGTATCGATCCGATCGCCGTCGGCGATATCCAGCACATCATCTTTCATTTGAAGGAGCGCGGCATCGGCGTCCTGGTGACCGATCACAACGTCCGCGAGACGCTCCGCATCACCGATCGCGCCTACATCGTCCACGACGGGGTCATTTTCAAAAGTGGAACGCCCGCCAGCCTCGCCGCCGACCAGGAAGTCCGACGGATTTATCTGGGGGCCGAGTTCCGATTGGACTAA
PROTEIN sequence
Length: 242
MATLRTRDLTKSYGGRTVVRSVNLEVASGEIVGLLGPNGAGKTTTFYMTVGLTAPDSGRVEIDGQDVTDDPMYIRARKGIGYLPQEPSIFRGLTVEQNLLAILETTDLSPAARRARLGELLAELNLTPLAHAPAHTLSGGERRRVEITRALVVSPKFILLDEPFAGIDPIAVGDIQHIIFHLKERGIGVLVTDHNVRETLRITDRAYIVHDGVIFKSGTPASLAADQEVRRIYLGAEFRLD*