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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_12318_7

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 10897..12324

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 475.0
  • Bit_score: 938
  • Evalue 3.70e-270
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=12554063 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 481.0
  • Bit_score: 730
  • Evalue 1.10e-207
RNA polymerase sigma54 factor similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 490.0
  • Bit_score: 451
  • Evalue 2.80e-124

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGGGCATTCAGCAAAAACTTCACACCCGGCTTGTTCAGAAGCTGATCCTGACGCCATCCCTTCAGCAGGCGATCAAGCTGCTCCCGATGTCGACGCTCGAGTTGTCGGATCTGCTGAATCAGGAGATGGTGGAGAACCCGATGCTCGAGGAGGTGCCGACTGAGGAGTTGCAGCCGGTCGACGCCTCGGCGGCGCCTGAGAAGGCGGAGGTCAAGAGCGAGGTCGCGAAGGCCGACACATGGGACGATCAGGACTACGAGTACTTCTTTGGCGACTACCTCGACGATGGGTACCGGCCACGGGCGCCACAGGAGATCAAGGAGCTGCCGCCCATCGAGAACACGCTGTCGACGGCGAGCTCGCTGGCCGATCATTTGATGTGGCAGCTCTCGATGCAGACCGACGACCCGCTCACTCGCGAGATTGGCTCGGCCATCATCGGCAACCTGGACGATGACGGATATTTGGTGGCGTCTTTCGAGGAGCTGGCGGCCATGGGGCCGTGGCCGGTCGAGGATGTTGAACGTACGCTGAAGCTGGTCCAGGGGTTCGATCCGGTCGGTGTCGCGGCGCGCGATCTCCAGGAGTGTCTGTTGCTGCAACTGCGGCATCTTGGGCTGGAGGGCACGCCGACAGAAAAGATCGTCGCCGACCACCTGCGTCTTCTTCAGAACCATCAGGTGCCGGAGATCGCCAAGAAGCTCGGGTTGACGATCGACGATCTGAAGGAGCACATCGAGGTCATCCGCAACCTGGATCCGAAGCCGGGGAGCCGTTACAACCCGACGCAGTCCCAGTACGTCATTCCTGACGTGTATGTGATCAAGGTCGAAGATCAGTATGTGGCCGTCCTGAACGAGGACGGGCTGCCCCAGATGCGGATCAGTCCGGTGTACCGGCGCCTGCTGGACAAGAACGCCGGCAACAGCGACGAGACGCGCGCCTACGTCAAAGACAAGTTCCGCTCGGCGCTCTGGTTGATCAAATCGGTGGAGCAGCGCCAGAAAACGATCCACAAGGTCGCCAATAGCATCATTGCCTTTCAGCGGGATTTTCTCGATCGCGGGATCGAGCATCTGCGGCCGCTCGTGCTGCGCGATGTGGCGAACGATATCGGGATGCACGAATCAACGGTCAGTCGCGTCGTCACCAACAAGTACATGCACACCCCGCAGGGTGTGTTCGAGATGAAGTACTTCTTCCACAGTGGTATCAATAGCTCGTATGGCGAGAGCGTCTCGTCGGTGACGATCAAACAGCGCATCCGGAAGATCATCGAGAACGAGGACCCGAGAAAACCCTTGAGCGATTCACGCATCGTCGAGATTCTCAAGCGCGAGGGGTTGCAGCTCGCGAGACGCACCATCGCGAAGTATCGCGAGGAGCTCAAGATTGCGACCTCGAACCAGCGAAAGGTCTTGTACTGA
PROTEIN sequence
Length: 476
MGIQQKLHTRLVQKLILTPSLQQAIKLLPMSTLELSDLLNQEMVENPMLEEVPTEELQPVDASAAPEKAEVKSEVAKADTWDDQDYEYFFGDYLDDGYRPRAPQEIKELPPIENTLSTASSLADHLMWQLSMQTDDPLTREIGSAIIGNLDDDGYLVASFEELAAMGPWPVEDVERTLKLVQGFDPVGVAARDLQECLLLQLRHLGLEGTPTEKIVADHLRLLQNHQVPEIAKKLGLTIDDLKEHIEVIRNLDPKPGSRYNPTQSQYVIPDVYVIKVEDQYVAVLNEDGLPQMRISPVYRRLLDKNAGNSDETRAYVKDKFRSALWLIKSVEQRQKTIHKVANSIIAFQRDFLDRGIEHLRPLVLRDVANDIGMHESTVSRVVTNKYMHTPQGVFEMKYFFHSGINSSYGESVSSVTIKQRIRKIIENEDPRKPLSDSRIVEILKREGLQLARRTIAKYREELKIATSNQRKVLY*