ggKbase home page

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_5

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3563..4453)

Top 3 Functional Annotations

Value Algorithm Source
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 579
  • Evalue 3.60e-162
tyrA; prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] id=12557015 bin=CNBR_ACIDO species=Lactobacillus plantarum genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 290.0
  • Bit_score: 196
  • Evalue 2.70e-47
prephenate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 286.0
  • Bit_score: 179
  • Evalue 1.30e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGCAGTTACCAGTTGTTCAGCCCGGCCGTCCACGCGAGGGGCAGTCGCCGATCTTCCAGAAGATCGGCATCGTCGGCCTGGGGCTCATCGGGGGATCGATTGCGCTCGCCGCGCGTCAGATCTGGCCGGCGTCTCTCGTCATCGCGGTCGACAACAAGGACGTGCTCGAAACGGCGATGCGGCTGCACGTGGTTGACGTGGCCGCCGACGATCGCATCATCCTTGCCGAAGCCGACCTCATCGTGCTCGCGGCTCCGGCCCTGCAGAACATCGCCGTGATGAACGATCTTGACGAGTACGTGCGGCAGAGGGCGATTGTGACCGACACGACCAGCACGAAGCGCGACATCGTGGCCGCCGCGCGCCGTCTGCCGCCGCAGTTCACATTCGTTGGTGGTCATCCGCTCGGGGGCGCAGCGAAAGGTGGGATCGAGCACGCGCGCCCGGATCTGTTTCAGGGCCGGCCGTGGCTGTTGACGCCGGAGGGCGACGCCACGGGCCCCGCGATCGAGAAGCTGTCGGCCTTCGTCCGAGCGCTGGGCGCAGAGCCTCGCCTGCTCGCACCCGATGCGCACGATCGGCTGCTGGCGCTTCTCAGTCACTTGCCGCAGTTGACCGCCAGCGCGCTGATGCAGGTGGTCGGCGACGCGGTTGGTGATCGCGGTCTTGAGTTCGCCGGTCCGGGACTTGCCGACACCACGCGTCTGGCGTCGAGCCCGGCCGACATCTGGAAGGACATCGCCGCGACCAACGCCGACCACATCGGGCCGGCGCTCGATCGGCTGATTGAGGTGCTGCAGGACCTGCGCGCGGATCTCACGACGGGCGATCGCCTGACCGAGGTCTTTTCCGCGGCCACACGATGGAGGGAAGCGCTCAATAAAACGTGA
PROTEIN sequence
Length: 297
MQLPVVQPGRPREGQSPIFQKIGIVGLGLIGGSIALAARQIWPASLVIAVDNKDVLETAMRLHVVDVAADDRIILAEADLIVLAAPALQNIAVMNDLDEYVRQRAIVTDTTSTKRDIVAAARRLPPQFTFVGGHPLGGAAKGGIEHARPDLFQGRPWLLTPEGDATGPAIEKLSAFVRALGAEPRLLAPDAHDRLLALLSHLPQLTASALMQVVGDAVGDRGLEFAGPGLADTTRLASSPADIWKDIAATNADHIGPALDRLIEVLQDLRADLTTGDRLTEVFSAATRWREALNKT*