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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3..1163
DNA (1161bp) protein (387aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] id=12557019 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cell wall hydrolase/autolysin
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1248..1424)
DNA (177bp) protein (59aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1434..2942)
DNA (1509bp) protein (503aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] id=12557017 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
leucyl aminopeptidase (EC:3.4.11.1)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3044..3520
DNA (477bp) protein (159aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3563..4453)
DNA (891bp) protein (297aa)
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
tyrA; prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] id=12557015 bin=CNBR_ACIDO species=Lactobacillus plantarum genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
prephenate dehydrogenase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4541..5587)
DNA (1047bp) protein (349aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NJ1_SOLUE
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5595..5900)
DNA (306bp) protein (102aa)
chorismate mutase (EC:5.4.99.5); K04093 chorismate mutase [EC:5.4.99.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Chorismate mutase n=2 Tax=Geobacter metallireducens RepID=Q39U90_GEOMG
chorismate mutase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5915..6853)
DNA (939bp) protein (313aa)
tryptophan synthase, alpha chain; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
tryptophan synthase, alpha chain; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] id=12557014 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tryptophan synthase subunit alpha
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7163..8368)
DNA (1206bp) protein (402aa)
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] id=12557013 bin=CNBR_ACIDO species=Mycobacterium hassiacum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tryptophan synthase subunit beta
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8337..8969)
DNA (633bp) protein (211aa)
trpF; n-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
trpF; n-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase id=4397380 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9031..9891)
DNA (861bp) protein (287aa)
trpC_[H]; Indole-3-glycerol phosphate synthase (EC:4.1.1.48) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
trpC_[H]; Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
hypothetical protein id=12557011 bin=CNBR_ACIDO species=Spiribacter sp. UAH-SP71 genus=Spiribacter taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9888..10922)
DNA (1035bp) protein (345aa)
anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
anthranilate phosphoribosyltransferase id=12557010 bin=CNBR_ACIDO species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
anthranilate phosphoribosyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10970..11542)
DNA (573bp) protein (191aa)
trpG; anthranilate synthase component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
trpG; anthranilate synthase component II (EC:4.1.3.27)
Glutamine amidotransferase of anthranilate synthase id=3234896 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11550..13028)
DNA (1479bp) protein (493aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
anthranilate synthase, component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] id=12557008 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
anthranilate synthase component I (EC:4.1.3.27)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13009..14478)
DNA (1470bp) protein (490aa)
hypothetical protein; K13832 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K13832 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] id=12557007 bin=CNBR_ACIDO species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
shikimate 5-dehydrogenase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14825..16678
DNA (1854bp) protein (618aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12557006 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16681..18972
DNA (2292bp) protein (764aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CD9_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18973..19797)
DNA (825bp) protein (275aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19794..20426)
DNA (633bp) protein (211aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12557003 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ECF subfamily RNA polymerase sigma-24 factor
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20588..21874
DNA (1287bp) protein (429aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12557002 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22057..22848)
DNA (792bp) protein (264aa)
Putative dipeptide ABC transporter n=1 Tax=uncultured bacterium RepID=Q20JX8_9BACT
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
binding-protein-dependent transport system inner membrane protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22871..23314)
DNA (444bp) protein (148aa)
peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein id=14624625 bin=bin5_DeltaP species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
peptide ABC transporter permease
Displaying 22 items

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