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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_4651_19

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(19794..20426)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 417
  • Evalue 9.80e-114
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12557003 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 200.0
  • Bit_score: 237
  • Evalue 1.70e-59
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 187.0
  • Bit_score: 141
  • Evalue 2.10e-31

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 633
GTGCCACCCGCTCCCGGGGACTCTGCTGTTCAGCCAGCACGTGCCAACGAATGGCTCGACATCGGCGGCCGCGACGCCGTCCTGGCGCAGCGCTGTGCCAGCGGGGACGAAGGCGCGTACGTGGAGCTGGTGGGCGAGCACCAGCGGATGGTCGTCCAGCTCGCGATGAACTTGCTTGGCGATCGCGACGAAGCGTTGGACCTCTCCCAGGACGTGTTCCTCCGGGTCTTCCGCACCATCGGCCGGTTCCGCGGTCACTCGAGCCTTCGCACATGGATGTACCGCATCACCGTCAATCAGGTCCGCAACCGCCAGCGTTTCTGGCGCCGCCGGCATCGCGCCGATCAGGTGTCCCTCGATCAGCACGAAGCGGCGCACGGTGAGTGTGCGTCGGGTGGGGAATCGACGCCCGACCGGTTGCTGGCTCAAAAGGAGCTCGCAGGGCGCCTGGAGGATGCGCTGGGGCGGCTGCCGTTCGATCAAAGAACAGCCATTGTGCTACGCGAGATCGACGGCCTGAGCTACGAAGAGATCGCCTATTCCCTGGGGGTAGCGGTCGGCACCGTCAAGTCGCGCCTGACCCGTGCTCGTCAGGCGCTTCGTCTGGAACTTCGTGACGCGAGGACCTTATGA
PROTEIN sequence
Length: 211
VPPAPGDSAVQPARANEWLDIGGRDAVLAQRCASGDEGAYVELVGEHQRMVVQLAMNLLGDRDEALDLSQDVFLRVFRTIGRFRGHSSLRTWMYRITVNQVRNRQRFWRRRHRADQVSLDQHEAAHGECASGGESTPDRLLAQKELAGRLEDALGRLPFDQRTAIVLREIDGLSYEEIAYSLGVAVGTVKSRLTRARQALRLELRDARTL*