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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_11

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_65_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(7199..8569)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 456.0
  • Bit_score: 884
  • Evalue 4.70e-254
sigma-54 dependent DNA-binding response regulator id=12556982 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 453.0
  • Bit_score: 575
  • Evalue 5.70e-161
sigma-54-dependent transcriptional response regulator similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 454.0
  • Bit_score: 455
  • Evalue 1.40e-125

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGTCTGCGCCGACCATCCTTGTCGTTGACGACGAACCGCTCATTCGCTGGTCCTTGACCACGCGTCTGGGCGAGGAGGGGTACTACGTCCTCGAGGCCGATACGGCCGCCGCAGCGCTCGATCGGATGCGGGAGGGCGTCGACCTCGTCCTGCTCGATTACCGGCTGCCCGATGCGGACGGCCTGGCGGTCCTCAAGAAAATCAAGGAGCACGACCCCGACACGCTGGTCATTCTGCTCACTGCCCATGTGAGCGTGGAGACCGCCGTCGAGGCGATGAAGCAGGGTGCCTATCACTACCTCAACAAGCCGTTCAATATCGACGAGATCGTTCTGCTCGTCGAGAAGGCGCTCGAAACGACGCGGCTGCGTCGCGAGGTGCGCACGTTGCGGGCCACGCAGGCCCAGCCGTTCAGCCTCGATCGCCTGATCGGCGACAGCCTGGCGATGGTCGAGGTGCGAGCGCTCCTGCAGAAGGTGGCGGCGAGCCCCGCGTCAACCGTGCTCCTGACCGGAGAGAGCGGCACCGGGAAGGATCTGGCCGCGAAGATCATCCACTACGCGAGCGACCGGGCGAGCAAGCCGTTCATGAACATCACGTGTTCAGCCTTGCCCGAGCAGCTGCTCGAGAGCGAGCTGTTCGGGCACGAGCGCGGAGCGTTCACCGGCGCGGATCGCCAGAAGCGGGGACTCCTCGAATCGGCCGACGGCGGCACGGTGTTTCTGGACGAGATTGGCGAGATGATGCCATTGCTCCAGGCGAAGCTGCTGCGGTTTCTCGAAGAGAAGACCTTCAAGCGTGTGGGCGCGTCCACCGACATCCACGTCGACGTCCGGGTGATTGCCGCCACCAACAAGCGTCTCGAGGACGAAGTACGCCAGGGGAAGTTTCGGGAGGATTTGTACTATCGCCTGAACGTCCTGCCGATTGCGCTGCCGCCCTTGCGGGCCAAGGCTGATGATGTGCCGCTGCTGGTCAACTACTACATCGACATCTTCAATCGCGAGTTCAAGAAGCGCGTCCGTGGCGTCGCCCCCGATGCGATGGCCCGGCTTCAGGCCTACACGTGGCCAGGTAACGTGCGCGAGCTGCGGAACGCCATCGAGCGAGCGATGCTGCTGAGCGACGAGGAGCCAGTTCTCGGCGTCGATCAGTTCCTGCTCGGCGGCGGCCATGCCCGCATCAGCGAGGGCTTCGAGTTGCCCGCGAGCGGCGTTGACCTCGAGCAATTGGAGCGGTCGCTCGTGGTGCAGGCGCTCGATCGCAGCGGATGGAACCAGACCAAGGCGGCCGGCCTTCTCGGCCTCAATCGCGATCAGATCCGGTATCGTGTCGAGAAATTCAAGCTCGAGCGGCCGGCCCAGGCCTGA
PROTEIN sequence
Length: 457
MSAPTILVVDDEPLIRWSLTTRLGEEGYYVLEADTAAAALDRMREGVDLVLLDYRLPDADGLAVLKKIKEHDPDTLVILLTAHVSVETAVEAMKQGAYHYLNKPFNIDEIVLLVEKALETTRLRREVRTLRATQAQPFSLDRLIGDSLAMVEVRALLQKVAASPASTVLLTGESGTGKDLAAKIIHYASDRASKPFMNITCSALPEQLLESELFGHERGAFTGADRQKRGLLESADGGTVFLDEIGEMMPLLQAKLLRFLEEKTFKRVGASTDIHVDVRVIAATNKRLEDEVRQGKFREDLYYRLNVLPIALPPLRAKADDVPLLVNYYIDIFNREFKKRVRGVAPDAMARLQAYTWPGNVRELRNAIERAMLLSDEEPVLGVDQFLLGGGHARISEGFELPASGVDLEQLERSLVVQALDRSGWNQTKAAGLLGLNRDQIRYRVEKFKLERPAQA*