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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3..281
DNA (279bp) protein (93aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

281..559
DNA (279bp) protein (93aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(623..964)
DNA (342bp) protein (114aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1199..1669
DNA (471bp) protein (157aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1629..2723)
DNA (1095bp) protein (365aa)
Predicted permease PerM family protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WJA7_9GAMM
permease PerM family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
permease PerM family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2804..4114
DNA (1311bp) protein (437aa)
glutamate dehydrogenase (NAD(P)(+)) (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glutamate dehydrogenase (NAD(P)(+)) (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=12555816 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glutamate dehydrogenase (NAD(P)(+)) (EC:1.4.1.3)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4122..5861
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037ECBED
phosphoglycolate phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphoglycolate phosphatase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5891..6166)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QSH0_NOSS7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6274..6519)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QHX8_9ZZZZ
addiction module antitoxin, putative Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
addiction module antitoxin, putative
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6567..7133)
DNA (567bp) protein (189aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G478_9RHIZ
Protein of unknown function (DUF2585) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Protein of unknown function (DUF2585)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7199..8569)
DNA (1371bp) protein (457aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sigma-54 dependent DNA-binding response regulator id=12556982 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sigma-54-dependent transcriptional response regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8657..9049)
DNA (393bp) protein (131aa)
response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
response regulator
sigma-54 dependent DNA-binding response regulator id=14626189 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9238..10704)
DNA (1467bp) protein (489aa)
Sensor histidine kinase; K14986 two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PAS domain S-box n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WNE6_9BRAD
Sensor histidine kinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10780..11139)
DNA (360bp) protein (120aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11178..11681
DNA (504bp) protein (168aa)
Universal stress protein family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Universal stress protein family id=12556984 bin=CNBR_ACIDO species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Universal stress protein family
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11683..12633
DNA (951bp) protein (317aa)
UspA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UspA domain-containing protein
hypothetical protein id=12554007 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12713..14557)
DNA (1845bp) protein (615aa)
cadA-B; cadmium-transporting ATPase; K01552 [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Heavy metal translocating P-type ATPase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RVT8_9PLAN
cadA-B; cadmium-transporting ATPase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14874..15281
DNA (408bp) protein (136aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15275..15811
DNA (537bp) protein (179aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=24470344 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15811..16140
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16082..16597
DNA (516bp) protein (172aa)
TonB family protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
TonB-like protein; K03832 periplasmic protein TonB id=16945797 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
TonB family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16707..17588
DNA (882bp) protein (294aa)
Putative phage integrase protein n=2 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M884_RHIL3
putative phage integrase protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
integrase/recombinase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17598..18809
DNA (1212bp) protein (404aa)
transposase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000380A410
putative transposase related protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative transposase y4qJ
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19343..20434)
DNA (1092bp) protein (364aa)
Putative transposase n=3 Tax=Chromatiaceae RepID=H8Z636_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20627..22945
DNA (2319bp) protein (773aa)
cation transporting P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000382D451
actP-2; copper-translocating P-type ATPase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22950..23300)
DNA (351bp) protein (117aa)
SgraIC control protein n=1 Tax=Streptomyces griseus RepID=Q9F6L1_STRGR
Xre family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
transcription factor,eukaryotic mbf1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_27
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23377..23643
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_28
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23758..24060
DNA (303bp) protein (101aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_29
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

24213..25436
DNA (1224bp) protein (408aa)
Outer membrane efflux protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4B1_MYXSD
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
outer membrane efflux protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_6808_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25433..26626
DNA (1194bp) protein (398aa)
RND family heavy metal efflux transporter MFP subunit n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1W7_CORCM
czcB1; RND family heavy metal efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
czcB1; RND family heavy metal efflux transporter MFP subunit
Displaying items 1-30 of 59 in total

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