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RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(3..776)
DNA (774bp) protein (258aa)
outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
outer membrane protein
Probable outer membrane efflux protein id=4495846 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(766..1434)
DNA (669bp) protein (223aa)
TetR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
Regulatory protein, TetR family id=4519185 bin=GWF2_Bacteroidetes_35_48 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
TetR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

2202..2492
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_4
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(2489..3385)
DNA (897bp) protein (299aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R6B2_OWEHD
metalloendopeptidase-like membrane protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
metalloendopeptidase-like membrane protein
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

3515..6094
DNA (2580bp) protein (860aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
Putative uncharacterized protein id=4108790 bin=GWF2_Bacteroidetes_33_38 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

6139..6564
DNA (426bp) protein (142aa)
Integral membrane protein CcmA involved in cell shape determination Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
hypothetical protein AnHS1_01758 id=1897963 bin=GWE2_Bacteroidetes_29_8 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
cell shape determination protein CcmA
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

6521..6766
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U628_CROAH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

6756..7127
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R6B9_OWEHD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

7269..8342
DNA (1074bp) protein (358aa)
ATP synthase subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
ATP synthase subunit a n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U630_CROAH
ATP synthase subunit A
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_10
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

8379..8603
DNA (225bp) protein (75aa)
ATP synthase F0 subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
ATP synthase F0 subunit C n=1 Tax=Pedobacter arcticus RepID=UPI0003149A44
ATP synthase F0 subunit C
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

8687..9187
DNA (501bp) protein (167aa)
ATP synthase subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
ATP synthase subunit b id=4204339 bin=GWF2_Bacteroidetes_38_335 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
ATP synthase subunit B
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

9194..9751
DNA (558bp) protein (186aa)
ATP synthase f1, delta subunit; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034DCAAA
ATP synthase f1, delta subunit
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_13
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

9769..11349
DNA (1581bp) protein (527aa)
proton translocating ATP synthase, F1 alpha subunit; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
ATP synthase subunit alpha n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R6C4_OWEHD
proton translocating ATP synthase, F1 alpha subunit
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

11422..12303
DNA (882bp) protein (294aa)
ATP synthase F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
ATP synthase gamma chain id=3654155 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
ATP synthase F1 subunit gamma
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_15
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

12555..16214
DNA (3660bp) protein (1220aa)
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
integral membrane sensor signal transduction histidine kinase id=3804233 bin=GWF2_Bacteroidetes_33_38 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_16
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

16284..17468
DNA (1185bp) protein (395aa)
Radical SAM domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7F6_NIAKG
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
radical SAM protein
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(17472..18515)
DNA (1044bp) protein (348aa)
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
Predicted protein id=2169990 bin=GWB2_Bacteroidetes_32_14 species=Parabacteroides sp. D13 genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
oxidoreductase domain-containing protein
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(18528..19286)
DNA (759bp) protein (253aa)
Methyltransferase, FkbM family n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AH92_FLELS
FkbM family methyltransferase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
FkbM family methyltransferase
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_19
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(19297..22374)
DNA (3078bp) protein (1026aa)
formate-dependent nitrite reductase, membrane component Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
hypothetical protein AtheD1_04817 id=4241749 bin=GWF2_Bacteroidetes_33_38 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
membrane protein
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_trna_1
unknown

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22609..22681
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_20
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(22952..23488)
DNA (537bp) protein (179aa)
uhpA; response regulator Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
Two component transcriptional regulator, LuxR family id=4154380 bin=GWF2_Bacteroidetes_33_38 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
uhpA; response regulator
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_rifcsplowo2_12_scaffold_9730_21
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(23765..24040)
DNA (276bp) protein (92aa)
two-component system sensor histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
two-component system sensor histidine kinase (EC:2.7.13.3)
Histidine kinase n=1 Tax=Flavobacterium sp. F52 RepID=J1KU25_9FLAO
Displaying 22 items

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