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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1033)
DNA (1032bp) protein (344aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase id=12552699 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1224..1364)
DNA (141bp) protein (47aa)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1526..2965
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM79 RepID=J3DA75_9PSED
hypothetical Protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical Protein rbh
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3305..5386)
DNA (2082bp) protein (694aa)
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
TonB-dependent receptor id=12552697 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TonB-dependent receptor
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5565..5960)
DNA (396bp) protein (132aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12552137 bin=BDI tax=BDI organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5997..6248)
DNA (252bp) protein (84aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12552136 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6295..6852)
DNA (558bp) protein (186aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=12552135 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
peptide methionine sulfoxide reductase (EC:1.8.4.11)
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6939..7619
DNA (681bp) protein (227aa)
TetR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
TetR family transcriptional regulator id=12552134 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TetR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7624..8793
DNA (1170bp) protein (390aa)
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
RND family efflux transporter MFP subunit id=12552133 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RND family efflux transporter MFP subunit
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8812..11985
DNA (3174bp) protein (1058aa)
nodulation protein nolG-like Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
nodulation protein nolG-like id=12552132 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
acriflavin resistance protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12031..12741
DNA (711bp) protein (237aa)
type 11 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
type 11 methyltransferase id=12552131 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
type 11 methyltransferase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12767..13108
DNA (342bp) protein (114aa)
rhodanese domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
rhodanese domain-containing protein id=12552130 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rhodanese domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13170..14495
DNA (1326bp) protein (442aa)
TolC family type I secretion outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
TolC family type I secretion outer membrane protein id=12552129 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TolC family type I secretion outer membrane protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14473..15645)
DNA (1173bp) protein (391aa)
Glucose sorbosone dehydrogenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7G5_ACISJ
glucose sorbosone dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glucose sorbosone dehydrogenase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15765..16373
DNA (609bp) protein (203aa)
nlp/p60 protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
nlp/p60 protein id=12552127 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
nlp/p60 protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16387..16761)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HSW5_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16939..17628
DNA (690bp) protein (230aa)
adenylate/guanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
adenylate/guanylate cyclase id=12552126 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
adenylate/guanylate cyclase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17750..18004
DNA (255bp) protein (85aa)
transglycosylase-associated protein id=12552125 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
transglycosylase-associated protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
transglycosylase-associated protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18036..18551
DNA (516bp) protein (172aa)
hypothetical protein id=12552124 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18597..19967)
DNA (1371bp) protein (457aa)
tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1] id=12552123 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tryptophanase (EC:4.1.99.1)
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20357..21883
DNA (1527bp) protein (509aa)
high-affinity choline transport protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glycine betaine transporter opuD; K05020 glycine betaine transporter id=5080864 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
high-affinity choline transport protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21890..23512)
DNA (1623bp) protein (541aa)
glucose-methanol-choline oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glucose-methanol-choline oxidoreductase id=12552122 bin=BDI species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glucose-methanol-choline oxidoreductase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23730..24236)
DNA (507bp) protein (169aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12552121 bin=BDI species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24415..25482)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12552120 bin=BDI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25699..26646
DNA (948bp) protein (316aa)
tRNA-dihydrouridine synthase a; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
tRNA-dihydrouridine synthase A; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] id=12552119 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
tRNA-dihydrouridine synthase A
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26653..29403)
DNA (2751bp) protein (917aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW34_9BURK
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29606..30715
DNA (1110bp) protein (370aa)
RelA/SpoT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
RelA/SpoT domain-containing protein id=12552116 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RelA/SpoT domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30888..32633
DNA (1746bp) protein (582aa)
Polyhydroxyalkanoate depolymerase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW32_9BURK
polyhydroxyalkanoate depolymerase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
polyhydroxyalkanoate depolymerase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32642..33304
DNA (663bp) protein (221aa)
RnfABCDGE type electron transport complex subunit B; K03616 electron transport complex protein RnfB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
RnfABCDGE type electron transport complex subunit B; K03616 electron transport complex protein RnfB id=12552113 bin=BDI species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RnfABCDGE type electron transport complex subunit B
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_40_rifcsplowo2_12_scaffold_1400_30
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33318..34832)
DNA (1515bp) protein (505aa)
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
methyl-accepting chemotaxis sensory transducer id=12552112 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
methyl-accepting chemotaxis sensory transducer
Displaying items 1-30 of 48 in total

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