ggKbase home page

RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_1
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

196..2685
DNA (2490bp) protein (830aa)
outer membrane protein assembly complex, YaeT protein; K07277 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Outer membrane protein assembly complex, YaeT protein id=4718605 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
outer membrane protein assembly complex, YaeT protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_2
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

2693..3598
DNA (906bp) protein (302aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative uncharacterized protein id=4718604 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

3618..4658
DNA (1041bp) protein (347aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase id=3677837 bin=GWA2_Elusimicrobia_66_18 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_4
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

4661..5536
DNA (876bp) protein (292aa)
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase (EC:3.5.1.- 4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase (EC:3.5.1.- 4.2.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase id=4718602 bin=GWA2_Elusimicrobia_69_24 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_5
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

5702..6184
DNA (483bp) protein (161aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ id=4718577 bin=GWA2_Elusimicrobia_69_24 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_6
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

6218..7036
DNA (819bp) protein (273aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase id=4718576 bin=GWA2_Elusimicrobia_69_24 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_7
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

7050..7931
DNA (882bp) protein (294aa)
hypothetical protein; K09949 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Uncharacterized protein conserved in bacteria DUF1009 id=3176003 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_8
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

7948..8994
DNA (1047bp) protein (349aa)
oxidoreductase family protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Oxidoreductase family protein id=3677832 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
oxidoreductase family protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_9
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

9032..10288
DNA (1257bp) protein (419aa)
lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase id=3677831 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_10
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

10297..11670
DNA (1374bp) protein (458aa)
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
ABC-type multidrug transport system, ATPase and permease component id=4718572 bin=GWA2_Elusimicrobia_69_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_11
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

11627..12064
DNA (438bp) protein (146aa)
ABC transporter-like protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
ABC-type multidrug transport system, ATPase and permease component id=4718572 bin=GWA2_Elusimicrobia_69_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ABC transporter-like protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_12
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

12152..12871
DNA (720bp) protein (240aa)
zinc/iron transporter Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Zinc transporter ZupT id=3685456 bin=GWA2_Elusimicrobia_51_34 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
zinc/iron transporter
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_13
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

12858..14300
DNA (1443bp) protein (481aa)
guanosine polyphosphate pyrophosphohydrolases/synthetase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
guanosine polyphosphate pyrophosphohydrolases/synthetase (EC:2.7.6.5)
Guanosine polyphosphate pyrophosphohydrolase/synthetase id=4718571 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_14
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


comp(14270..14482)
DNA (213bp) protein (71aa)
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
50S ribosomal protein L28 id=4437681 bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
50S ribosomal protein L28
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_15
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

14515..16674
DNA (2160bp) protein (720aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
ATP-dependent DNA helicase RecG id=3677827 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ATP-dependent DNA helicase RecG
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_16
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

16697..17176
DNA (480bp) protein (160aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase id=4605326 bin=GWA2_Ignavibacteria_55_11 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_26793_17
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(17390..18709)
DNA (1320bp) protein (440aa)
Transposase and inactivated derivatives n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D0N7_PELTS
transposase and inactivated derivatives Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
transposase and inactivated derivatives
Displaying 17 items

View Taxonomy