ggKbase home page

RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_1
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

157..1800
DNA (1644bp) protein (548aa)
malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
malate synthase (EC:2.3.3.9)
malate synthase n=1 Tax=Alicyclobacillus pohliae RepID=UPI000361B98A
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_2
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

1817..3103
DNA (1287bp) protein (429aa)
Isocitrate lyase n=2 Tax=Bacillus RepID=U5L499_9BACI
isocitrate lyase Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
isocitrate lyase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

3178..3708
DNA (531bp) protein (177aa)
Sigma 54 modulation protein; K05808 putative sigma-54 modulation protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Sigma 54 modulation protein id=4498272 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Sigma 54 modulation protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_4
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

3843..4796
DNA (954bp) protein (318aa)
serine kinase of the HPr protein; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
HPr kinase/phosphorylase id=4498273 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
serine kinase of the HPr protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_5
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

4774..5634
DNA (861bp) protein (287aa)
hypothetical protein; K06958 UPF0042 nucleotide-binding protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
UPF0042 nucleotide-binding protein Emin_0125 id=1856950 bin=GWB2_Elusimicrobium_63_22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
hypothetical protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_6
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

5665..6108
DNA (444bp) protein (148aa)
PTS system fructose-specific transporter subunit IIA Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative uncharacterized protein id=4036687 bin=GWA2_Elusimicrobia_66_18 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
PTS system fructose-specific transporter subunit IIA
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_7
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

6105..6575
DNA (471bp) protein (157aa)
PTS system sorbose subfamily IIB component Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
PTS system, IIB component, putative id=4498276 bin=GWA2_Elusimicrobia_69_24 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
PTS system sorbose subfamily IIB component
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_8
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

6576..7193
DNA (618bp) protein (206aa)
PTS family phosphotransferase mannose-specific enzyme IIC; K02795 PTS system, mannose-specific IIC component Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative uncharacterized protein id=4498277 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
phosphotransferase system, mannose-type, protein IIC
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_9
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

7377..8111
DNA (735bp) protein (245aa)
PTS system, mannose/fructose/sorbose family, IID subunit; K02796 PTS system, mannose-specific IID component Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
PTS system mannose/fructose/sorbose family IID component id=4498278 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
PTS mannose transporter subunit IID
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_10
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

8122..8388
DNA (267bp) protein (89aa)
phosphotransferase system, phosphocarrier protein HPr; K11189 phosphocarrier protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
ptsH; phosphocarrier protein HPr; K11189 phosphocarrier protein id=7200581 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
phosphotransferase system, phosphocarrier protein HPr
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_11
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

8388..10103
DNA (1716bp) protein (572aa)
PTS system EI component; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Phosphoenolpyruvate-protein phosphotransferase id=4498280 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
PTS system EI component rbh
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_12
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

10107..11897
DNA (1791bp) protein (597aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Elongation factor 4 id=4498281 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
GTP-binding protein LepA
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_13
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

11912..12907
DNA (996bp) protein (332aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
signal peptidase I (EC:3.4.21.89)
Signal peptidase id=4498282 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_14
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

12904..14223
DNA (1320bp) protein (440aa)
membrane-bound serine protease; K07403 membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative uncharacterized protein id=2005331 bin=GWA2_Elusimicrobia_56_46 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
membrane-bound serine protease
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_15
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

14358..16346
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GEQ5_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_16
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

16466..17158
DNA (693bp) protein (231aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_7718_17
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(17188..19506)
DNA (2319bp) protein (773aa)
ddl; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
D-alanine-D-alanine ligase-like protein id=4036712 bin=GWA2_Elusimicrobia_66_18 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ddl; D-alanine--D-alanine ligase
Displaying 17 items

View Taxonomy