ggKbase home page

RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_1
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

213..446
DNA (234bp) protein (78aa)
SpoVT/AbrB domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Transcriptional regulator, AbrB family id=2260628 bin=GWB2_CP_45_9 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
SpoVT/AbrB domain-containing protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_2
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

430..849
DNA (420bp) protein (140aa)
nucleic acid-binding protein, contains PIN domain Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Probable ribonuclease VapC id=4571307 bin=GWA2_Ignavibacteria_55_11 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
nucleic acid-binding protein, contains PIN domain
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(916..3465)
DNA (2550bp) protein (850aa)
glycogen/starch/alpha-glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Phosphorylase id=4727822 bin=GWA2_Elusimicrobia_69_24 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glycogen/starch/alpha-glucan phosphorylase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_4
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(3478..4062)
DNA (585bp) protein (195aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
hypothetical protein id=2209275 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_5
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(4059..7574)
DNA (3516bp) protein (1172aa)
Fibronectin type III domain protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Tetratricopeptide TPR_2 repeat protein id=3544782 bin=GWA2_Elusimicrobia_69_24 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Fibronectin type III domain protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_6
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(7606..9069)
DNA (1464bp) protein (488aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_cur
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B id=3544780 bin=GWA2_Elusimicrobia_69_24 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_7
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(9050..9517)
DNA (468bp) protein (156aa)
ADP-ribose pyrophosphatase n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KAU0_ELUMP
ADP-ribose pyrophosphatase Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
ADP-ribose pyrophosphatase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_8
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(9487..10971)
DNA (1485bp) protein (495aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobi
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EMV0_9CHLR
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_9
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(10968..11255)
DNA (288bp) protein (96aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_cur
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=1250097 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_10
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(11257..13476)
DNA (2220bp) protein (740aa)
superfamily I DNA and RNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Superfamily I DNA and RNA helicase id=3526085 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
superfamily I DNA and RNA helicase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_11
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(13473..14855)
DNA (1383bp) protein (461aa)
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
23S rRNA (Uracil-5-)-methyltransferase RumA id=4982190 bin=GWA2_Elusimicrobia_66_18 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RNA methyltransferase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_12
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(14852..15922)
DNA (1071bp) protein (357aa)
GTP-binding protein; K06942 Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative uncharacterized protein id=1912026 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
GTP-binding protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_17296_13
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(15942..16229)
DNA (288bp) protein (96aa)
TrmA; SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; K00599 [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RNA methyltransferase id=5014895 bin=GWA2_Elusimicrobia_66_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RNA methyltransferase
Displaying 13 items

View Taxonomy