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RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_1
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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1..543
DNA (543bp) protein (181aa)
crossover junction endodeoxyribonuclease RuvC; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Crossover junction endodeoxyribonuclease RuvC id=4720795 bin=GWA2_Elusimicrobia_69_24 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
crossover junction endodeoxyribonuclease RuvC
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_2
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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540..1157
DNA (618bp) protein (206aa)
Holliday junction resolvasome DNA binding subunit; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Holliday junction ATP-dependent DNA helicase RuvA id=4788933 bin=GWC2_Elusimicrobia_51_8 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
Holliday junction resolvasome DNA binding subunit
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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1154..2185
DNA (1032bp) protein (344aa)
Holliday junction resolvasome helicase subunit; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Holliday junction ATP-dependent DNA helicase RuvB id=1842614 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Holliday junction resolvasome helicase subunit
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_4
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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2190..3389
DNA (1200bp) protein (400aa)
stage II sporulation-related protein ; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
SpoIID/LytB domain protein id=4720851 bin=GWA2_Elusimicrobia_69_24 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
stage II sporulation-related protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_5
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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3376..4539
DNA (1164bp) protein (388aa)
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase id=4983120 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_6
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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4536..5681
DNA (1146bp) protein (382aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase id=4579120 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_7
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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5671..5988
DNA (318bp) protein (106aa)
preprotein translocase Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Protein translocase subunit yajC id=1842628 bin=GWA2_Elusimicrobia_66_18 species=Thalassospira profundimaris genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
preprotein translocase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_8
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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6019..7440
DNA (1422bp) protein (474aa)
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Protein translocase subunit SecD id=4983123 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
protein-export membrane protein SecD
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_9
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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7445..7738
DNA (294bp) protein (98aa)
preprotein translocase subunit SecF n=1 Tax=Thioalkalivibrio sp. ALM2T RepID=UPI0003773258
secF; protein-export membrane protein F SecF Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
secF; protein-export membrane protein F SecF
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_10
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

7924..8421
DNA (498bp) protein (166aa)
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Protein translocase subunit SecF id=3068541 bin=GWA2_Elusimicrobia_51_34 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
secF; preprotein translocase subunit SecF
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_11
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

8483..8947
DNA (465bp) protein (155aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
hypothetical protein id=4579100 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_12
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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8948..9601
DNA (654bp) protein (218aa)
hypothetical protein; K09778 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Uncharacterized protein conserved in bacteria DUF374 id=1842857 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_13
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

9598..10947
DNA (1350bp) protein (450aa)
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Three-deoxy-D-manno-octulosonic-acid transferase-like protein id=4579092 bin=GWA2_Elusimicrobia_69_24 species=Chromohalobacter salexigens genus=Chromohalobacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
kdtA; CMP-3-deoxy-D-manno-octulosonate--lipid A tetraacyldisaccharide 3-deoxy-D-manno-octulosonate transferase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_14
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

10937..12142
DNA (1206bp) protein (402aa)
rnd; ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Ribonuclease D id=4238760 bin=GWA2_Elusimicrobia_69_24 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
rnd; ribonuclease D
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_15
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

12237..12503
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_30916_16
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(12599..12994)
DNA (396bp) protein (132aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A141_MAHA5
winged helix family two component transcriptional regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9
winged helix family two component transcriptional regulator
Displaying 16 items

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