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RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226

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Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

3..86
DNA (84bp) protein (28aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

151..600
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZP23_9BACT
cytoplasmic protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
cytoplasmic protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

653..1339
DNA (687bp) protein (229aa)
cytochrome c biogenesis protein (EC:4.4.1.17); K06196 cytochrome c-type biogenesis protein id=5048645 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
cytochrome c biogenesis protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
cytochrome c biogenesis protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

1354..2526
DNA (1173bp) protein (391aa)
KWG repeat protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X2G5_9NOST
KWG repeat protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(2649..5357)
DNA (2709bp) protein (903aa)
cation-transporting ATPase A (EC:3.6.3.10); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
calcium-transporting P-type ATPase, PMR1-type (EC:3.6.3.8)
Strongly similar to cation-transporting ATPase PacL id=4281991 bin=GWF2_OP3_43_52 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(5587..8787)
DNA (3201bp) protein (1067aa)
cebA; copper/silver efflux system, membrane component Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Heavy metal efflux pump, CzcA family id=4281992 bin=GWF2_OP3_43_52 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cebA; copper/silver efflux system, membrane component
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(8803..10086)
DNA (1284bp) protein (428aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Efflux transporter, RND family, MFP subunit id=4281994 bin=GWF2_OP3_43_52 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(10083..11465)
DNA (1383bp) protein (461aa)
outer membrane efflux protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Outer membrane efflux protein id=4281997 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
outer membrane efflux protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(11674..12186)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000376E8A2
metal dependent phosphohydrolase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
metal dependent phosphohydrolase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(12281..13090)
DNA (810bp) protein (270aa)
4Fe-4S protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U8Z0_9EURY
4Fe-4S ferredoxin Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
4Fe-4S ferredoxin
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(13194..13964)
DNA (771bp) protein (257aa)
Strongly similar to molybdopterin synthesis protein MoeB and thiamin biosynthesis protein ThiF n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PV71_9BACT
UBA/THIF-type NAD/FAD binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
molybdopterin biosynthesis protein MoeB
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(13973..14179)
DNA (207bp) protein (69aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(14176..15318)
DNA (1143bp) protein (381aa)
Tyrosine lyase ThiH n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TEZ5_CALNY
tyrosine lyase thih; K03150 thiamine biosynthesis ThiH Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
tyrosine lyase thih
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(15349..16137)
DNA (789bp) protein (263aa)
thiG; thiamine biosynthesis protein ThiG; K03149 thiamine biosynthesis ThiG Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Thiazole synthase id=4694246 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
thiG; thiamine biosynthesis protein ThiG
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(16251..16853)
DNA (603bp) protein (201aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Methylase involved in ubiquinone/menaquinone biosynthesis id=3183903 bin=GWB1_CP_36_13 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(16850..17983)
DNA (1134bp) protein (378aa)
homoserine O-acetyltransferase; K00641 homoserine O-acetyltransferase [EC:2.3.1.31] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
metX; homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31] id=14623448 bin=bin5_DeltaP species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
homoserine O-acetyltransferase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(17976..19265)
DNA (1290bp) protein (430aa)
O-acetyl-L-homoserine sulfhydrolase / O-acetyl-L-serine sulfhydrolase (EC:2.5.1.47); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
sat:SYN_01255 O-acetyl-L-homoserine sulfhydrolase / O-acetyl-L-serine sulfhydrolase (EC:2.5.1.47); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] id=126311 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
O-acetyl-L-homoserine sulfhydrolase / O-acetyl-L-serine sulfhydrolase (EC:2.5.1.47)
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(19280..20206)
DNA (927bp) protein (309aa)
cysteine synthase a; K01738 cysteine synthase A [EC:2.5.1.47] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Cysteine synthase A n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4QBR9_CALH1
cysteine synthase a
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(20323..20745)
DNA (423bp) protein (141aa)
transcriptional regulator n=1 Tax=Clostridium tunisiense RepID=UPI0002EA0823
rrf2; RRF2 family protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
rrf2; RRF2 family protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(20858..22510)
DNA (1653bp) protein (551aa)
hydroxylamine reductase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Hydroxylamine reductase id=2230843 bin=GWB2_Elusimicrobium_63_22 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
hydroxylamine reductase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22742..23185)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZRV0_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(23245..25794)
DNA (2550bp) protein (850aa)
secA; translocase binding subunit (ATPase) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Protein translocase subunit SecA id=2030764 bin=GWD2_RBX1-related_39_127 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
secA; translocase binding subunit (ATPase)
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(25791..26150)
DNA (360bp) protein (120aa)
putative sigma(54) modulation protein; K05808 putative sigma-54 modulation protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
SSU ribosomal protein S30P;sigma 54 modulation protein id=1828362 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative sigma(54) modulation protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(26194..26814)
DNA (621bp) protein (207aa)
Phosphoribosyltransferase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKL0_THEYD
phosphoribosyltransferase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
phosphoribosyltransferase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

26969..27583
DNA (615bp) protein (205aa)
ATP-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
transcriptional regulator id=24610718 bin=RAAC11 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RAAC11 organism_group=Unknown_CP
ATP-binding protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

27796..28539
DNA (744bp) protein (248aa)
triosephosphate isomerase ; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Triosephosphate isomerase id=4315575 bin=GWF2_OP3_38_59 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
triosephosphate isomerase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

28686..28790
DNA (105bp) protein (35aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

28787..28945
DNA (159bp) protein (53aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

28942..29919
DNA (978bp) protein (326aa)
fbaA; fructose-bisphosphate aldolase class II (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase id=2669338 bin=GWF2_WWE1_40_14 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_WWE1_40_14 organism_group=WWE1
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_226_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

30009..31214
DNA (1206bp) protein (402aa)
6-phosphofructokinase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A2Q2_MELRP
phosphofructokinase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
phosphofructokinase
Displaying items 1-30 of 108 in total

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