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RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(3..614)
DNA (612bp) protein (204aa)
ppdK; pyruvate, phosphate dikinase; K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Pyruvate, phosphate dikinase id=4855767 bin=GWC2_ACD39_50_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
ppdK; pyruvate, phosphate dikinase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(996..1346)
DNA (351bp) protein (117aa)
Ribosomal silencing factor RsfS n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D414_PELTS
hypothetical protein; K09710 ribosome-associated protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(1373..2353)
DNA (981bp) protein (327aa)
cell envelope-related transcriptional attenuator Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Cell envelope-related transcriptional attenuator id=4153423 bin=GWF2_OP9-related_38_17 species=Thermanaerovibrio acidaminovorans genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
cell envelope-related transcriptional attenuator
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(2346..2912)
DNA (567bp) protein (189aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYN5_9CLOT
metal dependent phosphohydrolase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
metal dependent phosphohydrolase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(2905..3162)
DNA (258bp) protein (86aa)
RNP-1 like RNA-binding protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5P0_DESAS
RNP-1 like RNA-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RNP-1 like RNA-binding protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

3377..4219
DNA (843bp) protein (281aa)
AroE; shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000364D1E6
AroE; shikimate 5-dehydrogenase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

4577..5131
DNA (555bp) protein (185aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=2043729 bin=GWD2_Deltaproteobacteria_55_8 species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

5128..6069
DNA (942bp) protein (314aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=1702996 bin=GWB2_Nitrospirae_rel_47_37 species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6054..7229
DNA (1176bp) protein (392aa)
Type II secretory pathway, component PulD n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KB03_HALHC
type II secretory pathway, component PulD Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
type II and III secretion system protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(7343..7969)
DNA (627bp) protein (209aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase id=2057099 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(7972..9021)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NT50_9SPHI
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

9264..9935
DNA (672bp) protein (224aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(9954..10448)
DNA (495bp) protein (165aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(10460..11488)
DNA (1029bp) protein (343aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Thermincola potens (strain JR) RepID=D5XEH5_THEPJ
Holliday junction DNA helicase RuvB
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(11481..13592)
DNA (2112bp) protein (704aa)
lytic murein transglycosylase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Uncharacterized protein id=3718330 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
lytic murein transglycosylase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

13666..14673
DNA (1008bp) protein (336aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12); K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] id=14425851 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14717..15235
DNA (519bp) protein (173aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

15240..16022
DNA (783bp) protein (261aa)
inorganic polyphosphate/ATP-NAD kinase; K00858 NAD+ kinase [EC:2.7.1.23] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BL41_THEXL
inorganic polyphosphate/ATP-NAD kinase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(16019..16531)
DNA (513bp) protein (171aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(16536..16745)
DNA (210bp) protein (70aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(16766..16984)
DNA (219bp) protein (73aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

17151..17468
DNA (318bp) protein (106aa)
Periplasmic divalent cation tolerance protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQK4_9BACT
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
CutA1 divalent ion tolerance protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(17492..18532)
DNA (1041bp) protein (347aa)
Fic family protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Fic family protein id=1764443 bin=GWE2_RBX1_39_32 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Fic family protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(18565..19821)
DNA (1257bp) protein (419aa)
Uncharacterized RNA methyltransferase NEQ053 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Y053_NANEQ
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

19857..20252
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA076-D13 RepID=UPI00037FA446
acyl-CoA thioester hydrolase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
acyl-CoA thioester hydrolase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(20367..21392)
DNA (1026bp) protein (342aa)
engD; GTP-dependent nucleic acid-binding protein EngD Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
EngD id=1726884 bin=GWB2_Desulfobacterales_56_26 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
engD; GTP-dependent nucleic acid-binding protein EngD
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21681..22550)
DNA (870bp) protein (290aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

22705..24366
DNA (1662bp) protein (554aa)
DNA mismatch repair protein MutL n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MR24_9BACT
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
DNA mismatch repair protein MutL
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

24892..25299
DNA (408bp) protein (136aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFY0_KOSOT
nucleotidyltransferase substrate binding protein, HI0074 family Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
nucleotidyltransferase substrate binding protein, HI0074 family
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_372_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

25310..26497
DNA (1188bp) protein (396aa)
major facilitator superfamily protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
MFS transporter family protein id=2244733 bin=GWB2_Proteobacteria_55_19 species=Chlorobaculum tepidum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
major facilitator superfamily protein
Displaying items 1-30 of 57 in total

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