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RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(256..4074)
DNA (3819bp) protein (1273aa)
coiled-coil 170..191 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
coiled-coil 170..191 id=128210 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

4155..5123
DNA (969bp) protein (323aa)
aminoglycoside phosphotransferase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
aminoglycoside phosphotransferase id=24609817 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
aminoglycoside phosphotransferase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


5274..5540
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PM42_9ACTO
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
30S ribosomal protein S15
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

5541..7664
DNA (2124bp) protein (708aa)
pnp; polyribonucleotide nucleotidyltransferase Pnp (EC:2.7.7.8) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
pnp; polyribonucleotide nucleotidyltransferase Pnp (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSC0_9FIRM
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

7757..9418
DNA (1662bp) protein (554aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


9505..9813
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Clostridium sp. CAG:798 RepID=R6XAS9_9CLOT
ribosomal protein L21P Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
50S ribosomal protein L21
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


9814..10056
DNA (243bp) protein (81aa)
50S ribosomal protein L27 n=1 Tax=Citreicella sp. 357 RepID=I1AVM8_9RHOB
50S ribosomal protein L25 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
50S ribosomal protein L25
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

10082..11137
DNA (1056bp) protein (352aa)
glutamate 5-kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QV57_ACEAZ
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11134..12378
DNA (1245bp) protein (415aa)
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZXV2_MAHA5
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(12461..13240)
DNA (780bp) protein (260aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

13375..14016
DNA (642bp) protein (214aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase n=6 Tax=Thermoanaerobacter RepID=NADD_THEP3
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14056..15315
DNA (1260bp) protein (420aa)
Zn-dependent peptidase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Peptidase M16 domain protein id=1922939 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Zn-dependent peptidase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(15379..15948)
DNA (570bp) protein (190aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16087..16770
DNA (684bp) protein (228aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16815..17396
DNA (582bp) protein (194aa)
pyruvate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1); K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
pyruvate:ferredoxin oxidoreductase gamma subunit ; K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1] id=7201017 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
pyruvate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1)
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

17398..17694
DNA (297bp) protein (99aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta; K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LUV5_HIPMA
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

17695..18855
DNA (1161bp) protein (387aa)
pyruvate:ferredoxin oxidoreductase alpha subunit ; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Pyruvate:ferredoxin oxidoreductase alpha subunit n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZT1_UNCTG
pyruvate:ferredoxin oxidoreductase alpha subunit
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

18859..19788
DNA (930bp) protein (310aa)
pyruvate:ferredoxin oxidoreductase beta subunit ; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Pyruvate:ferredoxin oxidoreductase beta subunit n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZT2_UNCTG
pyruvate:ferredoxin oxidoreductase beta subunit
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

19801..20094
DNA (294bp) protein (98aa)
DNA-binding protein HU-beta n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y2P1_ANEAE
hbs; DNA-binding protein HU-alpha; K03530 DNA-binding protein HU-beta Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hbs; DNA-binding protein HU-alpha
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

20105..21628
DNA (1524bp) protein (508aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00036B17E0
single-stranded nucleic acid binding R3H domain-containing protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
single-stranded nucleic acid binding R3H domain-containing protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21616..22653)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=5 Tax=Pelosinus fermentans RepID=I8SE27_9FIRM
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
protein of unknown function UPF0118
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22650..24233)
DNA (1584bp) protein (528aa)
nadB; L-aspartate oxidase NadB (EC:1.4.3.16) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
nadB; L-aspartate oxidase NadB (EC:1.4.3.16)
L-aspartate oxidase NadB n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LLL4_THEPS
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

24382..24609
DNA (228bp) protein (76aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(24578..25495)
DNA (918bp) protein (306aa)
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
rsmH; ribosomal RNA small subunit methyltransferase H (EC:2.1.1.199)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ENF1_CLOPA
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

25659..26552
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGH6_9DELT
Uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(26575..27000)
DNA (426bp) protein (142aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(27173..27676)
DNA (504bp) protein (168aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

27973..28785
DNA (813bp) protein (271aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

28817..29581
DNA (765bp) protein (255aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase id=2096810 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_381_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

29789..31003
DNA (1215bp) protein (405aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Displaying items 1-30 of 86 in total

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