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RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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2..1171
DNA (1170bp) protein (390aa)
pyruvate, phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XP69_9BACT
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

1416..2174
DNA (759bp) protein (253aa)
deoxyguanosinetriphosphate triphosphohydrolase-like protein; K01129 dGTPase [EC:3.1.5.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Deoxyguanosinetriphosphate triphosphohydrolase n=5 Tax=Thermoanaerobacter RepID=E1SX31_THESX
deoxyguanosinetriphosphate triphosphohydrolase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

2253..3983
DNA (1731bp) protein (577aa)
Fis family transcriptional regulator; K02316 DNA primase [EC:2.7.7.-] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
DNA primase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J7C0_DESRM
Fis family transcriptional regulator
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

4002..5054
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003610D84
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RNA polymerase sigma factor RpoD
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(5405..5623)
DNA (219bp) protein (73aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(5826..6422)
DNA (597bp) protein (199aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium sp. CAG:964 RepID=R6U846_9CLOT
methyltransferase GidB
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(6426..8090)
DNA (1665bp) protein (555aa)
surface antigen (D15); K07277 outer membrane protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Surface antigen (D15) id=2187907 bin=GWE2_RBX1_39_32 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
surface antigen (D15)
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(8160..12803)
DNA (4644bp) protein (1548aa)
hypothetical protein; K09800 hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(12886..13770)
DNA (885bp) protein (295aa)
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Tyrosine recombinase XerC id=3681674 bin=GWF2_OP3_43_52 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
xerC_2; tyrosine recombinase XerC
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(13760..14188)
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
id=2012755 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14401..15708
DNA (1308bp) protein (436aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

15855..16544
DNA (690bp) protein (230aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(16591..18207)
DNA (1617bp) protein (539aa)
phosphoglycerate mutase (EC:5.4.2.1) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K635_9FIRM
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

18477..19319
DNA (843bp) protein (281aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Hypothetical membrane protein id=2868900 bin=GWF2_OP9_related_35_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(19453..20595)
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Thermincola potens (strain JR) RepID=D5XF01_THEPJ
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(20706..21959)
DNA (1254bp) protein (418aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22054..23655)
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0003186E79
pyruvate kinase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
pyruvate kinase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(23740..27270)
DNA (3531bp) protein (1177aa)
pyruvate phosphate dikinase (EC:2.7.9.1) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
pyruvate phosphate dikinase (EC:2.7.9.1)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-O17 RepID=UPI00036637FF
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

27436..27618
DNA (183bp) protein (61aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

27585..28856
DNA (1272bp) protein (424aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62); K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA (EC:2.6.1.62)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Orenia marismortui RepID=UPI0003750083
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

28887..29300
DNA (414bp) protein (138aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

29409..30158
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249) RepID=C7NCQ4_LEPBD
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

30211..34125
DNA (3915bp) protein (1305aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

34122..35105
DNA (984bp) protein (328aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_412_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

35596..35760
DNA (165bp) protein (55aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Displaying 25 items

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