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RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

2..2944
DNA (2943bp) protein (981aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

2962..6273
DNA (3312bp) protein (1104aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIJ6_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6333..8168
DNA (1836bp) protein (612aa)
subtilisin-like serine protease Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
alpha-2-macroglobulin domain-containing protein; K06894 id=24608527 bin=RAAC11 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=RAAC11 organism_group=Unknown_CP
S-layer protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

8184..9053
DNA (870bp) protein (290aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

9070..12405
DNA (3336bp) protein (1112aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12412..14109
DNA (1698bp) protein (566aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

14341..16131
DNA (1791bp) protein (597aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

16422..17789
DNA (1368bp) protein (456aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

17916..18209
DNA (294bp) protein (98aa)
putative transcriptional regulator Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
MerR family transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR id=24452020 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative transcriptional regulator
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

18244..21141
DNA (2898bp) protein (966aa)
ATPases with chaperone activity, ATP-binding subunit n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RM39_MOOTA
ATPases with chaperone activity, ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ATPases with chaperone activity, ATP-binding subunit
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21148..21852)
DNA (705bp) protein (235aa)
hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Tax=RIFOXYA2_F
hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase id=2095252 bin=GWE2_RBX1_39_32 species=Crinalium epipsammum genus=Crinalium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(21840..22463)
DNA (624bp) protein (208aa)
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH id=3773899 bin=GWF2_OP3_38_59 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(22454..23353)
DNA (900bp) protein (300aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CYI5_HALOH
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

23594..23890
DNA (297bp) protein (99aa)
10 kDa chaperonin n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8P4_THELD
chaperonin Cpn10; K04078 chaperonin GroES Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
chaperonin Cpn10
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

23918..25567
DNA (1650bp) protein (550aa)
60 kDa chaperonin; K04077 chaperonin GroEL Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
UPI00020A9C1C related cluster id=3830741 bin=GWF2_OP9-related_38_17 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
60 kDa chaperonin
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

25812..26249
DNA (438bp) protein (146aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase id=4387126 bin=GWA2_OP3_53_43 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

26246..26977
DNA (732bp) protein (244aa)
Cobalt-dependent proline dipeptidase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RE68_9EURY
cobalt-dependent proline dipeptidase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
cobalt-dependent proline dipeptidase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

26982..27632
DNA (651bp) protein (217aa)
ispD2; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD (EC:2.7.7.60) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ispD2; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKV6_CLOSH
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

27756..28562
DNA (807bp) protein (269aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

28624..28902
DNA (279bp) protein (93aa)
seg 26..35 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
seg 26..35 id=129697 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

28899..29144
DNA (246bp) protein (82aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(29209..29628)
DNA (420bp) protein (140aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

29739..30074
DNA (336bp) protein (112aa)
DNA polymerase beta domain protein region n=2 Tax=Oscillatoria RepID=D8G0J9_9CYAN
DNA polymerase subunit beta Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
DNA polymerase subunit beta
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

30061..30462
DNA (402bp) protein (134aa)
HEPN domain-containing protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein OsccyDRAFT_2874 id=4349720 bin=GWF2_Lentisphaerae_49_21 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
HEPN domain-containing protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

30463..31896
DNA (1434bp) protein (478aa)
anthranilate synthase, component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
anthranilate synthase, component I (EC:4.1.3.27)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000363084A
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

31954..33132
DNA (1179bp) protein (393aa)
rod-shape-determining protein MrdB-like protein; K05837 rod shape determining protein RodA Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
mrdB; rod shape determining protein; K05837 rod shape determining protein RodA id=7200206 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
rod-shape-determining protein MrdB-like protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(33147..34151)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IH55_9PLAN
Tfp pilus assembly protein PilF Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Tfp pilus assembly protein PilF
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(34201..34551)
DNA (351bp) protein (117aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

34746..34979
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MGM4_9EURY
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_289_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

34988..35467
DNA (480bp) protein (160aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Displaying items 1-30 of 40 in total

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