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RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_1
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(2..640)
DNA (639bp) protein (213aa)
flavodoxin Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=1966969 bin=GWE2_Clostridiales_32_10 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
flavodoxin
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_2
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(646..1122)
DNA (477bp) protein (159aa)
TspO and MBR n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B3A273
benzodiazepine receptor TspO Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_3
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

1254..1823
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI0003487480
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_4
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

1902..2642
DNA (741bp) protein (247aa)
Iron-sulfur flavoprotein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPS0_METAC
isf-8; iron-sulfur flavoprotein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
isf-8; iron-sulfur flavoprotein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

2644..3261
DNA (618bp) protein (206aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

3343..3972
DNA (630bp) protein (210aa)
pseudouridine synthase; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ribosomal large subunit pseudouridine synthase E n=1 Tax=Pontibacter roseus RepID=UPI000360FCDE
pseudouridine synthase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_7
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

4134..5063
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6100E
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

5185..6267
DNA (1083bp) protein (361aa)
Ribosome-binding ATPase YchF n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T6M1_THEA1
GTP-binding protein YchF; K06942 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
GTP-binding protein YchF
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_9
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6330..6725
DNA (396bp) protein (132aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_10
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

6709..7122
DNA (414bp) protein (138aa)
Single-stranded DNA-binding protein n=1 Tax=Lactobacillus helveticus CIRM-BIA 951 RepID=U6F5N5_LACHE
single-stranded DNA-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
single-stranded DNA-binding protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_11
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

7122..7511
DNA (390bp) protein (130aa)
Single-stranded DNA-binding protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0J1_DICTD
single-strand DNA-binding protein; K03111 single-strand DNA-binding protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
single-strand DNA-binding protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_12
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


7527..7760
DNA (234bp) protein (78aa)
30S ribosomal protein S18 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RS18_ALKOO
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
rpsR; 30S ribosomal protein S18
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_13
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists


7770..8195
DNA (426bp) protein (142aa)
50S ribosomal protein L9 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S182_THEOJ
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
50S ribosomal protein L9
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_14
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(8218..9546)
DNA (1329bp) protein (443aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I id=2184630 bin=GWE2_RBX1_39_32 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_15
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

9581..10366
DNA (786bp) protein (262aa)
AMMECR1 domain protein n=2 Tax=Desulfotomaculum RepID=F6B5T4_DESCC
AMMECR1 domain-containing protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
AMMECR1 domain-containing protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

10359..10865
DNA (507bp) protein (169aa)
hypothetical protein; K06990 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Putative uncharacterized protein id=2213019 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_17
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

10932..11984
DNA (1053bp) protein (351aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Thermincola potens (strain JR) RepID=D5XAD3_THEPJ
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

11981..13102
DNA (1122bp) protein (374aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AJ74_SEBTE
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

13103..13972
DNA (870bp) protein (290aa)
N-acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRB5_ACEAZ
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_20
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(14003..14764)
DNA (762bp) protein (254aa)
Tetratricopeptide repeat domain-containing protein n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PWV8_METTM
O-linked GlcNAc transferase Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
O-linked GlcNAc transferase
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_21
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(14930..18553)
DNA (3624bp) protein (1208aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_22
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

18812..20416
DNA (1605bp) protein (535aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_23
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(20443..21624)
DNA (1182bp) protein (394aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_24
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

21876..22556
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Uncharacterized protein id=2148130 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
hypothetical protein
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_25
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

22572..23789
DNA (1218bp) protein (406aa)
Ammonium transporter n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TFZ5_CALOO
ammonium transporter; K03320 ammonium transporter, Amt family Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
ammonium transporter
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_26
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

23810..24154
DNA (345bp) protein (115aa)
Nitrogen regulatory protein P-II n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7G0_DEHE1
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
nitrogen regulatory protein P-II
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_27
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(24207..24758)
DNA (552bp) protein (184aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_28
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(24984..26336)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E2NEU4_9BACE
putative ATPase (AAA+ superfamily) Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
putative ATPase (AAA+ superfamily)
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_29
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

comp(26493..27593)
DNA (1101bp) protein (367aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
RIFOXYA2_FULL_CP_36_21_rifoxya2_full_scaffold_605_30
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

27653..27781
DNA (129bp) protein (43aa)
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
Displaying 30 items

View Taxonomy