ggKbase home page

RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_1
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(65..709)
DNA (645bp) protein (215aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_2
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(781..2076)
DNA (1296bp) protein (432aa)
nickel-dependent hydrogenase large subunit Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Nickel-dependent hydrogenase large subunit id=1889192 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hydrogenase/sulfur reductase, alpha subunit
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_3
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2160..2627)
DNA (468bp) protein (156aa)
frhG; coenzyme F420-reducing hydrogenase, gamma subunit Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
NADH ubiquinone oxidoreductase 20 kDa subunit id=1889194 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
cytosolic NiFe-hydrogenase subunit delta
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_4
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2709..3440)
DNA (732bp) protein (244aa)
transcriptional regulator TrmB Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Transcriptional regulator, TrmB id=1263509 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
transcriptional regulator TrmB
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_5
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

3703..4284
DNA (582bp) protein (194aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_6
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

4293..4544
DNA (252bp) protein (84aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_7
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4629..4823)
DNA (195bp) protein (65aa)
Putative transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TGP8_9EURY
XRE family transcriptional regulator Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
XRE family transcriptional regulator
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_8
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4825..5211)
DNA (387bp) protein (129aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_9
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5373..5552)
DNA (180bp) protein (60aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_10
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5683..6003)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00037D5465
hypothetical protein; K08972 putative membrane protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
hypothetical protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_11
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6015..6413)
DNA (399bp) protein (133aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_12
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

6604..7413
DNA (810bp) protein (270aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_13
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(7418..8014)
DNA (597bp) protein (199aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036AA7DC
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_14
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8011..8415)
DNA (405bp) protein (135aa)
hemerythrin-like metal-binding protein; K07216 hemerythrin Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Methyl-accepting chemotaxis sensory transducer id=1899006 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hemerythrin-like metal-binding protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_15
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

8767..9279
DNA (513bp) protein (171aa)
Nudix 17..168 Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Nudix 17..168 id=136632 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_16
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

9485..10309
DNA (825bp) protein (275aa)
exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Exonuclease id=1816961 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
exonuclease
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_17
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

10398..11426
DNA (1029bp) protein (343aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Holliday junction ATP-dependent DNA helicase RuvB id=1816962 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Holliday junction DNA helicase RuvB
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_18
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11614..11880
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003717B44
hypothetical protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_19
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11958..12509
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003760732
hypothetical protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
hypothetical protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_20
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

12529..12951
DNA (423bp) protein (141aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_21
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

12971..14224
DNA (1254bp) protein (418aa)
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-) Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase id=1816965 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_22
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

14554..14745
DNA (192bp) protein (64aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_23
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

15445..15912
DNA (468bp) protein (156aa)
putative transcription termination factor Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
N utilization substance protein B homolog id=1816967 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
putative transcription termination factor
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_24
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

16076..16768
DNA (693bp) protein (231aa)
putative ribonuclease III (EC:3.1.26.3) Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
putative ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 id=1816969 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_25
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

16845..17114
DNA (270bp) protein (90aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_26
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

17181..17441
DNA (261bp) protein (87aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_27
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

17542..18597
DNA (1056bp) protein (352aa)
pilT; hypothetical protein; K02669 twitching motility protein PilT Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Pilus retraction protein PilT id=1816971 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
pilT; hypothetical protein
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_28
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

19033..19857
DNA (825bp) protein (275aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
RIFOXYA2_FULL_OD1_47_19_rifoxya2_full_scaffold_1494_29
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19939..22233)
DNA (2295bp) protein (765aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0Y3M8_AURAN
hypothetical protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
putative VCBS protein
Displaying 29 items

View Taxonomy